Genome Resequencing of the Honeybee Apis mellifera jemenetica (Hymenoptera: Apidae): A Key Tool towards Characterization, Conservation, and Genomic Selection

Table 6

Genome-wide distribution and annotation of copy number variation (CNV) in the Arabian honeybee samples.

Annotation	Sample
	J61	B31	A43	MK163	N21	TU21	MD101
CNV	552	2113	552	550	553	524	2824
Upregulated	230	225	207	201	208	212	250
Downregulated	322	1888	345	249	345	312	2574
CDS	473	6893	310	574	449	601	12694
cDNA_match	14	56	12	11	9	10	115
Exon	1986	9921	1808	2057	1914	1856	16588
Gene	268	1968	274	281	285	252	3082
Inc-RNA	335	435	329	331	275	297	443
mRNA	969	5288	921	1002	971	800	7673
miRNA	2	5	0	1	2	0	2
Primary_transcript	2	5	0	1	2	0	4
Pseudogene	12	14	11	11	11	8	11
rRNA	5	10	9	7	21	10	6
Region	552	2113	552	550	601	524	2824
Sequence feature	1	0	0	0	0	0	0
snRNA	0	0	0	0	0	0	1
SnoRNA	0	1	0	0	0	0	1
tRNA	1	3	1	0	1	0	28
Transcript	67	230	60	73	100	44	327