An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function

Table 2

The differences between proposed GA and Parsons' GA.

	Our GA	Parsons' GA
Gene of GA chromosome	Fragment with 2 reads	reads only
Fitness function	Equation (2)
Crossover	Order-based crossover
Mutation	swap mutation + greedy mutation	Swap mutation
Heuristic part	CRed and CRef	None
Scaffolding	possible	Not possible