Distribution of Genes and Repetitive Elements in the Diabrotica virgifera virgifera Genome Estimated Using BAC Sequencing

Table 2

Summary of contigs per BAC that were assembled from Roche-454 sequencing data.

Mid-tag library	BAC clone	Marker	Raw data (reads/kb)	Assembled data (reads/kb)	GenBank accession	Contig size (kb)
RL001	40F02	1304	23,300/10,298	21,525/97.8	JQ581035	19.6±22.2
RL002	89B10	1224	8,701/7,408	7,277/118.7	JQ581036	29.7±20.6
RL003	142B02	1203	29,444/12,894	19,447/30.5	JQ581037	4.3±3.6
RL005	191G22	1125	64,410/28,909	8,348/104.0	JQ581038	17.3±18.8
RL006	163F14	1304	9,495/3,523	22,530/101.7	JQ581039	25.4±7.2
RL007	156M20	1203	16,427/7,179	9,435/24.6	JQ581040	4.1±2.8
RL008	222P02	1345	43,702/20,431	0/0.0	FAILED	NA
RL009	213A05	1411	25,196/11,345	18,868/74.5	JQ581041	74.5±0.0
RL010	188M01	1300	19,912/9,238	18,478/90.6	JQ581042	15.1±9.7
		Total	240,587/111,225	125,908 (15,738 ± 6286)/642.3 (80.3±34.9)		13.6±20.1

NA: not applicable due to DNA sequencing failure.