Research Article
GNormPlus: An Integrative Approach for Tagging Genes, Gene Families, and Protein Domains
Table 5
The frequency of false negative and positive errors of GNormPlus.
| | FN | FP | Total | Percentage |
| Gene mention (GM) recognition | | | | | Gene/family/domain mention type confusion | 38 | 18 | 56 | 27.1% | Wrong boundary or missed gene mention | 18 | 18 | 36 | 17.4% | Not a gene mention | 0 | 15 | 15 | 7.3% | Gene normalization (GN) | | | | | Wrong gene identifier due to ambiguity | 19 | 18 | 37 | 17.9% | Insufficiency of the gene name dictionary | 19 | 0 | 19 | 9.2% | Not annotated in the gold standard | 0 | 17 | 17 | 8.2% | Nonhuman genes found | 0 | 11 | 11 | 5.3% | Others | 13 | 3 | 16 | 7.7% |
|
|