An Entropy-Based Position Projection Algorithm for Motif Discovery

Table 6

Results of the mouse embryonic stem cell data.

Datasets	Length	Seq. #	EPP	Weeder
CTCF	11	39601	CCAGAAGAGGGCG	TNGCCACCAGGGGGCGCNN
cMyc	9	3422	GCTCGTGGC	CGCACGTGGC
Esrrb	11	21644	GGTCAAGGTCA	GGTCAAGGTCA
Klf4	10	10872	GGGTGTGGCC	GGGTGTGGCC
Nanog	7	10342	CCATTCT	CCATTGTCTNNN
nMyc	10	7181	CGCACGTGGC	CGCACGTGGC
Smad1	16	1126	CTTTTGTTATTCAAAT	CCTTTGTTATGCAAAT
Oct4	15	3775	CATTGTTATGCAAA	CTTTGTTATGCAAAT
STAT3	9	2546	TTCCTGGAA	TTTCCNGGAA
Sox2	10	4525	TTGTTATGCA	CATTGTNATGCAAAT
Tcfcp2l1	11	26907	CCAGCCTAGCC	CCGGTTCAAACCGG
Zfx	10	10336	CTAGGCCGCG	CGCNAGGCCGCG