Inferring Molecular Processes Heterogeneity from Transcriptional Data

Table 4

List of functional marker genes that were used in the second case study.

Symbol	Name
Cell death
DDIT3	DNA Damage Inducible Transcript 3
ERN1	Endoplasmic Reticulum To Nucleus Signaling 1
JUN	Jun Proto-Oncogene, AP-1 Transcription Factor Subunit
SQSTM1	Sequestosome 1
SMPD1	Sphingomyelin Phosphodiesterase 1
TGFB1	Transforming Growth Factor Beta 1
PRNP	Prion Protein
CEBPB	CCAAT/Enhancer Binding Protein Beta
NQO1	NAD(P)H Quinone Dehydrogenase 1
NR4A1	Nuclear Receptor Subfamily 4 Group A Member 1
CTSB	Cathepsin B
ZMAT3	Zinc Finger Matrin-Type 3
Proliferation
CD24	CD24 Molecule
NRP1	Neuropilin 1
TNS3	Tensin 3
MYC	V-Myc Avian Myelocytomatosis Viral Oncogene Homolog
CD38	CD38 Molecule
CCNA2	Cyclin A2
FGF7	Fibroblast Growth Factor 7
MST1R	Macrophage Stimulating 1 Receptor
MYCN	V-Myc Avian Myelocytomatosis Viral Oncogene Neuroblastoma Derived Homolog
ETS1	ETS Proto-Oncogene 1, Transcription Factor
EDNRA	Endothelin Receptor Type A