Research Article

Comparative Genomic Analysis of Trichinella spiralis Reveals Potential Mechanisms of Adaptive Evolution

Table 3

T. spiralis PSGs correspond to C. elegans orthologs that confer severe RNAi phenotypes.

T. spiralis geneC. elegans geneDescriptor C. elegans RNAi phenotype

Tsp_09591/EFV53546.1M05B5.2hypothetical proteinLon (long) Unc (uncoordinated) thin (decreased girth slim) Gro (slow growth)

Tsp_09505/EFV52757.1W08F4.6hypothetical proteinPrl (paralyzed) Unc (uncoordinated) Lva (larval arrest) Lvl (larval lethal) Bmd
(body morphology defect) Ela (embryonic cell lineage abnormal)

EFV56123.1F32H2.5fatty acid synthaseEmb (embryonic lethal) Oth (other)

EFV54185.1T26E3.3PDZ domainEmb (embryonic lethal) Spo (Abnormal embryonic spindle position and orientation)

EFV60927.1C04C3.3pyruvate dehydrogenaseGro (slow growth) Emb (embryonic lethal)

EFV60724.1Y40B1A.4Zinc finger, C2H2 typeUnc (uncoordinated) Bmd (body morphology defect)

EFV56450.1F54C9.10GTP-bindingEmb (embryonic lethal)
ADP-ribosylation factor

EFV56859.1T06E6.2acyb-3 cyclin B like (G2/mitotic-specific cyclin-B3)Emb (embryonic lethal)

Descriptor, annotation based on KEGG Orthology and Interpro.
RNAi phenotype description (http://www.wormbase.org/).