Research Article

Gene Expression Profiles of Peripheral Blood Monocytes in Osteoarthritis and Analysis of Differentially Expressed Genes

Table 2

The top 30 GO terms.

GO IDGO nameDEG number valueFDRGene symbols

GO:0044281Small molecule metabolic process1211.65E − 344.62E − 31PPP1CB|PLCB1|CALM1|PIK3CD|PIK3R1|PIK3CA|PTEN|LYPLA1|AMD1|SACM1L|ARF3| INSIG1|PDK3|ABHD5|CHKB|IMPA1,…
GO:0007165Signal transduction1001.19E − 311.66E − 28IL7R|TNFSF12|TNFSF10|TNFSF4|PPP2R5C|PLCB1|CALM1|PIK3CB|PIK3CD|CASP1| TLR1| RAC2|STAT6|MAPK14|CAMK1|PAK2,…
GO:0045087Innate immune response641.57E − 241.47E − 21CASP1|ATF1|PIK3CA|PIK3R1|MAP3K7|MAP3K5|KRAS|TLR1|PTEN|
ATF2|CFP|PTPN11| IRF7|ACTB|CALM1,…
GO:0010467Gene expression691.53E − 231.07E − 20TNFSF13|PPP2R1A|RPL38|MAPK14|KARS|SMAD2|AIMP1|DICER1,…
GO:0006915Apoptotic process665.32E − 222.98E − 19IL1A|TNFSF10|TNFSF12|MAP3K7|CASP1|BAX|RAD21|DICER1|CASP4|PTEN|H1F0|FXR1|PSMD12|DAB2|CST3,…
GO:0000278Mitotic cell cycle472.64E − 201.23E − 17PPP1R12A|PPP1CB|PPP2R1A|NSL1|RFC5|RAD21|RBL2|RPA1|CEP63…
GO:0006351Transcription, DNA-dependent1141.32E − 195.28E − 17MAP3K7|ATF1|ATF6|STAT6|FOSL2|ASF1A|BBX|UCHL5|ATXN1|INO80 B|KANK2|CEBPE|SIRT1| SETD2|IRF5| BRD2|IKZF1|RB1,…
GO:0019221Cytokine-mediated signaling pathway271.63E − 195.70E − 17IL1A|IL6R|STAT2|STAT6|KRAS|CEBPA|PTPN11|CD44|IRF7|IRF5|IRF3|IRAK3|ZC3H15|CCR1,…
GO:0019048Virus-host interaction424.74E − 191.48E − 16MAP3K5|PIK3R1|KARS|BAX|TGFB1|CCR3|MDFIC| RB1|SIRT1,…
GO:0006468Protein phosphorylation432.25E − 186.30E − 16MAP3K11|MAP4K4|PIK3R1|PIK3CA|TGFB1|ADAM10|IRAK3|HIPK3|SMAD2| TLK1|CREB1|FYB|STK11,…
GO:0008380RNA splicing343.49E − 167.52E − 14PPP2R1A|SRSF11|PABPN1|CPSF1|SRSF3|CLASRP,…
GO:0015031Protein transport433.87E − 167.73E − 14RAB3D|ARRB2|RAB11A|ACAP1|NMD3|ARF3,…
GO:0044267Cellular protein metabolic process454.71E − 136.94E − 11ATF1|RPL38|ACTB|ATF6|CPA3|EIF4B|ETF1|SPCS2|CXXC1|ALG5|CCT6A,…
GO:0000090Mitotic anaphase244.61E − 125.87E − 10PPP2R1A|RAD21|PDS5A|PSMD3|SMC3|CLASP2,…
GO:0000087M phase of mitotic cell cycle267.27E − 128.85E − 10PPP2R1A|PSMD4|CLASP2|PSME3|ANAPC5|RAD21|RANBP2,…
GO:0000398mRNA splicing via spliceosome247.84E − 129.15E − 10SRSF11|PABPN1|CLP1|RBM22|PAPOLA|FUS|POLR2E|TRA2A|PRPF4B,…
GO:0001525Angiogenesis249.13E − 121.02E − 09TNFSF12|MAP3K7|MAPK14|PIK3CA|ELK3|DICER1|SIRT1,…
GO:0002224Toll-like receptor signaling pathway193.87E − 113.87E − 09MAP3K7|MAPK14|TLR7|IRF7|ATF1|ATF2|DUSP3|IRF3|HSP90B1|RPS6KA5|BTK| UNC93B1|ELK1|BCL10|UBE2D1,…
GO:0007049Cell cycle244.71E − 114.55E − 09PPP1CA|CAMK1|RB1CC1|CREBL2|PARD6A|CYLD|TLK1| IKZF1,…
GO:0006955Immune response297.21E − 116.73E − 09IL1A|IL7R|IL1RN|TNFSF10|TNFSF4|TNFSF13|TLR1|CCR1|IKBKAP,…
GO:0008283Cell proliferation295.42E − 104.27E − 08IL1A|RBL38|MAP3K11|PTEN|DAB2|FES|PA2G4|ASCC3|MS4A2,…
GO:0030155Regulation of cell adhesion105.49E − 104.27E − 08PPP2R1A|PPP1R12 A|PPP1CB|CYTH4|PTK2B| CYTIP| ENG|GSN,…
GO:0050852T-cell receptor signaling pathway166.55E − 104.96E − 08MAP3K7|PIK3CA|PIK3CB|PIK3R1|PIK3CD|RBCK1|PAK2|FYB|UBE2N|PTEN|WAS|FYN|NCK1|MALT1|CD4| BCL1
GO:0043065Positive regulation of apoptotic process208.03E − 105.92E − 08TNFSF10|PPP2R4|MAP3K5|PIK3R1|TGFB1|ATM|SIRT1|DNM2|LILRB1|CTNNB1|TSPO|HMGB1|BAX|ING3|IRF5|PRKDC,…
GO:0051403Stress-activated MAPK cascade101.92E − 091.38E − 07MAPK14|MAP3K7|ATF1|ATF2|ELK1|DUSP3|RPS6KA3|CREB1|RPS6KA1|RPS6KA5
GO:0007010Cytoskeleton organization104.27E − 092.49E − 07PRPF40 A|PHIP|SIPA1|PLD2|SVIL|PXN|TPM1|ZMYM4|CAPZB,…
GO:0050900Leukocyte migration146.19E − 093.54E − 07PIK3CB| PIK3CA|PIK3R1|KRAS|SIRPA| PTPN11|FYN|ITGB7,…
GO:0006954Inflammatory response191.11E − 086.21E − 07IL1A|PIK3CD|TLR1|TLR7|STAB1|TGFB1|HRH4|CCR3|CCR1|LTB4R,…
GO:0008219Cell death168.44E − 083.94E − 06MAP3K11|BCL10|FOSL2|CLN3|ATXN7|DCTN1|FUS|,…
GO:0006281DNA repair309.06E − 084.16E − 06BTG2|RFC5|SMC3|RPA1|TDG|CSNK1D|REV1,…