Integrated Analysis of lncRNA and mRNA Transcriptomes Reveals New Regulators of Ubiquitination and the Immune Response in Silica-Induced Pulmonary Fibrosis
Table 2
The top 25 upregulated and top 25 downregulated lncRNAs from case group compared with control group.
Upregulated lncRNAs
Downregulated lncRNAs
Accession
Symbol
Fold
p value
Accession
Symbol
Fold
p value
TC1700009890.hg.1
RP11-138I1.4
4.603
0.013
TC1200011466.hg.1
RP11-13A1.3
0.400
0.0094
TC0100008972.hg.1
RP4-620F22.2
4.37
0.0024
TC0X00010443.hg.1
LOC286437
0.404
0.0012
TC2200007220.hg.1
RPL41P3
4.298
0.013
TC2200008440.hg.1
RP4-539M6.21
0.418
0.007
TC1700009599.hg.1
RP11-609D21.3
3.66
0.012
TC1700007659.hg.1
RP11-333J10.2
0.434
0.00009
TC1500009338.hg.1
RP11-605F22.1
3.26
0.000
TC0X00010064.hg.1
FTX
0.445
0.0026
TC1900006725.hg.1
CTC-518P12.6
3.18
0.04
TC0800011834.hg.1
ASAP1-IT1
0.458
0.0095
TC1000007371.hg.1
AP001610.5
3.12
0.02
TC1100006449.hg.1
RP11-326C3.10
0.471
0.041
TC1600011549.hg.1
skeyglerbu
3.07
0.02
TC1700011172.hg.1
RP11-257O5.2
0.471
0.0015
TC1200011218.hg.1
RP11-368L12.1
3.05
0.00
TC0800010416.hg.1
RP11-11C20.3
0.479
0.0020
TC0500006875.hg.1
RP11-1143G9.4
2.94
0.00
TC0200015562.hg.1
AC083900.1
0.483
0.0005
TC1700011014.hg.1
CTD-2139B152
2.76
0.01
TC0500013315.hg.1
CTD-2306M10.1
0.486
0.013
TC0700011233.hg.1
rerlee
2.74
0.01
TC0300008280.hg.1
LINC01215
0.487
0.003
TC1700011336.hg.1
rasleebu
2.70
0.01
TC1500009462.hg.1
RP11-519C12.1
0.487
0.0004
TC1600011191.hg.1
RP11-264B14.2
2.65
0.03
TC1200011369.hg.1
RP11-530C5.4
0.494
0.0006
TC0100009018.hg.1
GS1-21A4.1
2.58
0.02
TC0100007717.hg.1
RP11-415J8.7
0.49
0.0006
TC0600012967.hg.1
fawnoybu
2.57
0.00
TC1200006889.hg.1
RP11-180M15.7
0.49
0.005
TC0900011401.hg.1
RP1-93H18.6
2.55
0.00
TC0100018423.hg.1
LINC01355
0.50
0.002
TC0100017733.hg.1
werteebo
2.50
0.00
TC1200010249.hg.1
RP11-996F15.6
0.51
0.005
TC1400008210.hg.1
TSNAX
2.49
0.01
TC1600008532.hg.1
RP11-319G9.3
0.51
0.001
TC1000010277.hg.1
RP11-638I2.8
2.49
0.007
TC1100011979.hg.1
RP11-178H8.7
0.51
0.001
TC0300009362.hg.1
RN7SL398P
2.46
0.000
TC0300013876.hg.1
EPHB1
0.51
0.003
TC0X00009457.hg.1
RP11-3P17.5
2.45
0.04
TC1300007758.hg.1
RP11-10E18.7
0.51
0.0001
TC14_GL000009v2_ra ndom00006439.hg.1
RN7SL15P
2.43
0.000
TC0100017904.hg.1
CHRM3-AS2
0.519
0.005
TC1100012004.hg.1
RP11-685N10.1
TC1100009942.hg.1
RP11-435B5.6
2.43
0.02
TC1400008411.hg.1
RP11-73M18.6
0.21
0.005
TC1700008351.hg.1
TRIM22
2.42
0.02
“---“ presents that no symbols are available in the microarray databases, but they were actually presenting dysregulation in the case group.
