Research Article

Recurrence-Associated Multi-RNA Signature to Predict Disease-Free Survival for Ovarian Cancer Patients

Table 5

Function enrichment analysis for genes in the ceRNA network.

Termp valueGenes

KEGGInflammatory bowel disease (IBD)6.29E − 05TGFB2; MAF; IL12A; HLA-DQB1
Leishmaniasis1.88E − 03TGFB2; IL12A; HLA-DQB1
Th1 and Th2 cell differentiation3.50E − 03MAF; IL12A; HLA-DQB1
Toxoplasmosis6.21E − 03TGFB2; IL12A; HLA-DQB1
Allograft rejection6.98E − 03IL12A; HLA-DQB1
Type I diabetes mellitus8.88E − 03IL12A; HLA-DQB1
Malaria1.14E − 02TGFB2; IL12A
Mineral absorption1.23E − 02STEAP2; MT1E
MAPK signaling pathway1.63E − 02TGFB2; KITLG; PDGFD; EFNA5
Tuberculosis2.14E − 02TGFB2; IL12A; HLA-DQB1
Proteoglycans in cancer2.88E − 02FZD1; TGFB2; TWIST1
Rap1 signaling pathway3.07E − 02KITLG; PDGFD; EFNA5
TGF-beta signaling pathway3.57E − 02TGFB2; NBL1
Rheumatoid arthritis3.64E − 02TGFB2; HLA-DQB1
Amoebiasis4.01E − 02TGFB2; IL12A
Hematopoietic cell lineage4.09E − 02KITLG; HLA-DQB1
Ras signaling pathway4.13E − 02KITLG; PDGFD; EFNA5
Melanogenesis4.39E − 02FZD1; KITLG
Chagas disease (American trypanosomiasis)4.55E − 02TGFB2; IL12A
BioCartaWnt/LRP6 Signalling_Homo sapiens_h_wnt-lrp6Pathway2.29E − 02FZD1
Role of Parkin in Ubiquitin-Proteasomal Pathway_Homo sapiens_h_parkinPathway2.61E − 02GPR37
NO2-dependent IL 12 Pathway in NK cells_Homo sapiens_h_no2il12Pathway2.93E − 02IL12A
Melanocyte Development and Pigmentation Pathway_Homo sapiens_h_melanocytepathway4.21E − 02KITLG
IL12 and Stat4 Dependent Signaling Pathway in Th1 Development_Homo sapiens_h_IL12Pathway4.84E − 02IL12A
ReactomeTransmembrane transport of small molecules_Homo sapiens_R-HSA-3825511.35E − 02SLC12A2; ATP7B; SLC15A2; ABCC5; STEAP2; MCOLN2
Hyaluronan biosynthesis and export_Homo sapiens_R-HSA-21428501.64E − 02ABCC5
Cation-coupled Chloride cotransporters_Homo sapiens_R-HSA-4261172.29E − 02SLC12A2
Peptide ligand-binding receptors_Homo sapiens_R-HSA-3752762.60E − 02GPR37; ANXA1; RLN2
Formyl peptide receptors bind formyl peptides and many other ligands_Homo sapiens_R-HSA-4444732.61E − 02ANXA1
Relaxin receptors_Homo sapiens_R-HSA-4448212.61E − 02RLN2
Muscle contraction_Homo sapiens_R-HSA-3970142.70E − 02ANXA1; KCNIP4; KCNK2
Response to metal ions_Homo sapiens_R-HSA-56605263.57E − 02MT1E
Metallothioneins bind metals_Homo sapiens_R-HSA-56612313.57E − 02MT1E
Tandem pore domain potassium channels_Homo sapiens_R-HSA-12963463.89E − 02KCNK2
EPH-Ephrin signaling_Homo sapiens_R-HSA-26823343.93E − 02EFNA5; KALRN
Purine salvage_Homo sapiens_R-HSA-742174.21E − 02ADK
Transport of inorganic cations/anions and amino acids/oligopeptides_Homo sapiens_R-HSA-4253934.24E − 02SLC12A2; SLC15A2
MHC class II antigen presentation_Homo sapiens_R-HSA-21322954.55E − 02KIF5C; HLA-DQB1
GO BPCopper ion import (GO:0015677)2.96E − 04ATP7B; STEAP2
Digestive tract development (GO:0048565)4.13E − 04TGFB2; PKDCC; GATA2
Embryonic organ development (GO:0048568)7.55E − 04TGFB2; KITLG; PKDCC
Copper ion transport (GO:0006825)9.51E − 04ATP7B; STEAP2
Embryonic cranial skeleton morphogenesis (GO:0048701)1.10E − 03SIX1; TWIST1
Embryonic digestive tract development (GO:0048566)1.96E − 03TGFB2; PKDCC
Embryonic skeletal system morphogenesis (GO:0048704)2.37E − 03SIX1; TWIST1
Regulation of phosphatidylinositol 3-kinase signaling (GO:0014066)2.44E − 03TGFB2; PDGFD; TWIST1
Regulation of angiogenesis (GO:0045765)2.85E − 03TGFB2; RLN2; TWIST1; GATA2
Iron ion import across plasma membrane (GO:0098711)1.96E − 02STEAP2
Carbohydrate phosphorylation (GO:0046835)3.57E − 02ADK
Muscle cell migration (GO:0014812)3.57E − 02SIX1
Ribonucleoside monophosphate biosynthetic process (GO:0009156)4.52E − 02ADK
Purine-containing compound salvage (GO:0043101)4.52E − 02ADK
Positive regulation of glycolytic process (GO:0045821)4.84E − 02PFKFB4
Positive regulation of coenzyme metabolic process (GO:0051197)4.84E − 02PFKFB4
Positive regulation of cellular catabolic process (GO:0031331)4.87E − 02PFKFB4; TWIST1
GO MFTranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding (GO:0001228)1.46E − 02EBF1; SIX1; GATA2; MEIS2
Neurotrophin TRKA receptor binding (GO:0005168)1.96E − 02EFNA5
Transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding (GO:0001077)2.05E − 02EBF1; SIX1; MEIS2
NAADP-sensitive calcium-release channel activity (GO:0072345)2.29E − 02MCOLN2
Type II transforming growth factor beta receptor binding (GO:0005114)2.61E − 02TGFB2
Phosphofructokinase activity (GO:0008443)2.61E − 02PFKFB4
Carbohydrate kinase activity (GO:0019200)4.21E − 02ADK
Ubiquitin protein ligase activity involved in ERAD pathway (GO:1904264)4.21E − 02TMEM129
Platelet-derived growth factor receptor binding (GO:0005161)4.21E − 02PDGFD
Nucleoside kinase activity (GO:0019206)4.52E − 02ADK

KEGG, Kyoto Encyclopedia of Genes and Genomes; GO, Gene Ontology; BP, biological process; MF, molecular function.