Comprehensive Analysis of mRNA Expression Profiles in Head and Neck Cancer by Using Robust Rank Aggregation and Weighted Gene Coexpression Network Analysis
Table 2
Detailed information of 24 datasets which were used in RRA analysis.
Time
Gene set
Platform
Number of probes
Country
Tumor type
Tumor sample number
Control sample number
2008
GSE10121
GPL6353
33484
Germany
OSCC
35
6
2017
GSE103412
GPL23978
39321
Denmark
OSCC
23
9
2008
GSE13399
GPL7540
36197
USA
HNSCC
8
8
2008
GSE13601
GPL8300
12625
USA
OSCC
31
26
2019
GSE138206
GPL570
9442
China
OSCC
6
6
2020
GSE143224
GPL5175
19076
Brazil
LSCC
14
11
2010
GSE23036
GPL571
22277
Spain
HNSCC
63
5
2010
GSE23558
GPL6480
41000
India
OSCC
27
5
2010
GSE25099
GPL5175
17881
China
OSCC
57
22
2011
GSE29330
GPL570
54675
USA
HNSCC
13
5
2011
GSE31056
GPL10526
17788
USA
OSCC
23
73
2011
GSE33205
GPL5175
22011
USA
HNSCC
44
25
2011
GSE34105
GPL14951
29377
Sweden
OSCC
62
16
2012
GSE37991
GPL6883
24526
China
OSCC
40
40
2012
GSE42743
GPL570
54645
USA
OSCC
74
29
2013
GSE51985
GPL10558
47220
China
LSCC
10
10
2014
GSE55550
GPL17077
50739
USA
OSCC
139
16
2014
GSE58911
GPL6244
33297
USA
HNSCC
15
15
2014
GSE59102
GPL6480
34664
Brazil
LSCC
29
13
2007
GSE6631
GPL8300
12625
USA
HNSCC
22
22
2007
GSE6791
GPL570
54675
USA
HNSCC
42
14
2016
GSE83519
GPL4133
43376
Netherlands
HNSCC
22
22
2016
GSE84957
GPL17843
77162
China
LSCC
9
9
2007
GSE9844
GPL570
54645
USA
OSCC
26
12
LSCC: laryngeal squamous cell cancer; OSCC: oral squamous cell cancer; HNSCC: head and neck cancer.
