Research Article
Gene-Gene Interaction Analysis for the Survival Phenotype Based on the Kaplan-Meier Median Estimate
Table 3
Top three two-way models identified by KM-MDR.
| | With all 565 SNPs | With 545 SNPs excluding 20 SNPs with main effects | | Model | TRSC | TSSC | CVC | value | Model | TRSC | TSSC | CVC | value |
| rs145504996
rs140557984 | 19.6297 | 23.0881 | 1 | 0.001 | rs779634111 rs777122838 | 19.6297 | 23.0881 | 1 | 0.000 |
| rs143372586
rs61937629 | 16.7108 | 22.4748 | 1 | 0.000 | rs145504996 rs140557984 | 15.2993 | 21.3833 | 1 | 0.000 |
| rs779634111
rs777122838 | 15.2993 | 21.3833 | 1 | 0.000 | rs201471889 rs150956058 | 16.5755 | 20.5237 | 1 | 0.001 |
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TRSC: training score; TSSC: testing score; CVC: cross-validation consistency.
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