Genome-Wide Analysis Reveals Genetic Potential for Aromatic Compounds Biodegradation of Sphingopyxis

Table 1

Summary for Sphingopyxis isolates used in this study.

Stains	Genome size (Mbp)	Staus	No. of chromosomes (plasmid)	No. of 16S operons	G+C (%)	Genome completeness	Isolation source
Sphingopyxis alaskensis RB2256	3.37	Complete	1 (1)	1	65.5	93.7%	Surface waters of Resurrection Bay, Alaska
Sphingopyxis baekryungensis DSM 16222	3.07	Draft	N/A	2	62.4	94.1%	Seawater of the Yellow Sea, Korea
Sphingopyxis bauzanensis DSM 22271	4.26	Draft	N/A	1	63.3	93.2%	Hydrocarbon-contaminated soil
Sphingopyxis flava R11H	4.16	Draft	N/A	1	63.8	94.2%	Hexachlorocyclohexane dumpsite
Sphingopyxis fribergensis Kp52	5.2	Complete	1 (1)	1	63.8	93.7%	Soil in Freiberg, Saxony, Germany
Sphingopyxis granuli NBRC 100800	4.26	Draft	N/A	1	66.4	93.2%	UASB bioreactor
Sphingopyxis indica DS15	4.15	Draft	N/A	1	65.7	94.2%	Hexachlorocyclohexane dumpsite in Lucknow
Sphingopyxis macrogoltabida 203 N	5.95	Complete	1 (2)	1	64.7	93.7%	Soil
Sphingopyxis sp. 113P3	4.66	Complete	1 (1)	1	64.0	93.2%	Activated sludge
Sphingopyxis sp. C-1	4.58	Draft	N/A	1	63.7	93.2%	Blooms of cyanobacteria
Sphingopyxis sp. EG6	3.88	Complete	1 (1)	1	64.6	93.7%	Industrial cooling water
Sphingopyxis sp. FD7	3.94	Complete	1 (1)	1	65.2	93.7%	Industrial cooling water
Sphingopyxis sp. MC1	3.65	Draft	N/A	1	65.2	92.8%	Activated sludge
Sphingopyxis sp. MG	4.22	Complete	1 (1)	1	66.4	93.2%	Sewage and soil
Sphingopyxis sp. MWB1	3.12	Draft	N/A	1	62.8	92.3%	Crude oil contaminated seashore
Sphingopyxis terrae subsp. terrae 203-1	3.98	Complete	1 (1)	1	64.6	93.2%	Activated sludge
Sphingopyxis terrae subsp. Ummariensis UI2	3.58	Draft	N/A	1	65.2	93.3%	HCH-contaminated dumpsite
Sphingopyxis witflariensis DSM14551	4.31	Draft	N/A	1	63.3	94.6%	Activated sludge
Sphingopyxis sp. YF1	4.37	Complete	1 (0)	2	66.6	93.2%	Blooms of cyanobacteria