Mass Spectrometry and Computer Simulation Predict the Interactions of AGPS and HNRNPK in Glioma

Table 3

Scores after ZDOCK and RDOCK docking.

Receptor protein	Ligand protein	Pose no.	ZDOCK score^a	E_RDOCK score^a	Clash^b
HNRPK	AGPS	1	25.32	-35.77	0
		2	24.64	-27.20	0
		3	24.10	-22.14	0
		4	23.98	-21.31	0
		5	24.18	-19.21	0

^aLower values of E_RDOCK and higher ZDOCK score indicate top/better docking of the complex. ^bClash “0” indicates no stearic clash between the proteins after being refined by the RDOCK protocol.