Transcriptomic Analyses Reveal Gene Expression Profiles and Networks in Nasopharyngeal Carcinoma

Table 2

Details of all datasets used and modified after selection from GEO database.

GSE	Publication	Upregulated genes	Downregulated genes	Platform	Sample size	Used as
GSE118719	Journal of Experimental and Clinical Cancer Research	4197	3226	Illumina HiSeq 4000	7 NPC; 4 controls	Excluded
GSE53819	Cell Cycle	188	450	Affymetrix Human Genome U133 Plus 2.0 Array	18 NPC; 18 controls	Analyzing set
GSE64634	Oncotarget	131	453	Affymetrix Human Genome U133 plus 2.0 Array	10 NPC; 4 controls	Analyzing set
GSE40290		192	285	Capitalbio 22 K Human oligo array version 1.0	14 NK-NPC; 8 controls	Analyzing set
GSE12452	Cancer Epidemiology, Biomarkers & Prevention	39	149	Illumina HiSeq 2000	21 NPC; 10 controls	Validation set
GSE68799		644	55	Illumina Hiseq 2000	35 NPC; 4 controls	Validation set