Investigation of Plant Antimicrobial Peptides against Selected Pathogenic Bacterial Species Using a Peptide-Protein Docking Approach

Figure 4

Protein-protein interactions between snakin-1 and oxygen-insensitive NADPH nitroreductase of H. pylori. (a) NADPH nitroreductase is represented in yellow color with orange-colored interacting residues, and snakin-1 is shown in blue color with green interacting residues. (b) All interacting residues between snakin-1 and NADPH nitroreductase protein of A. baumannii complex; hydrogen bonds are shown in blue color, and salt bridges are represented by red-colored lines. Other representing properties of amino acids are represented by different colors (positive: blue, neutral: green, negative: red, aliphatic: grey, Pro&Gly: orange, aromatic: pink, and Cys: yellow).

(a)

(b)