Research Article
NLRP3 Susceptible Gene Polymorphisms in Patients with Primary Gouty Arthritis and Hyperuricemia
Table 7
SNP functional annotation in HaploReg v4.1 and 3DSNP database.
| SNP | Ref | Alt | SNP functional annotation | 3D interacting gene |
| rs3738448 | G | T | Promoter histone marks, enhancer histone marks, DNAse, proteins bound, motifs changed | GALNT2, GCSAML, GCSAML-AS1, OR2B11, OR2C3, and OR2W5 | rs3806268 | G | C | Enhancer histone marks | GALNT2, GCSAML, GCSAML-AS1, OR2B11, OR2C3, and OR2W5 | rs7525979 | C | T | Enhancer histone marks, motifs changed | GALNT2, GCSAML, GCSAML-AS1, OR2B11, OR2C3, and OR2W5 |
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SNP: single-nucleotide polymorphism; Ref: reference; Alt: alternation; eQTL: expression quantitative trait loci.
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