Research Article

Intensification in Genetic Information and Acquisition of Resistant Genes in Genome of Acinetobacter baumannii: A Pan-Genomic Analysis

Table 3

Resistant genes against available therapeutic options for A. baumannii (ResFinder and ABRicat analyses).

Resistant geneAccession no.ResFinderABRicatCoverage

aac(3)-IaX15852Aminoglycoside resistanceGentamicin87.07865169
aac(3)-IIaCP023555Aminoglycoside resistanceGentamicin; tobramycin100
aac(6)-IanAP014611Warning: gene is missing from note files. Please inform curator.Amikacin; tobramycin100
aac(6)-IbcrEF636461Fluoroquinolone and aminoglycoside resistanceStreptomycin100
aac(6)-Ib-HangzhouFJ503047Warning: gene is missing from note files. Please inform curator.Streptomycin100
aadA1JQ480156Aminoglycoside resistanceStreptomycin100
aadA24DQ677333Aminoglycoside resistanceGentamicin; tobramycin98.97435897
aadA2bD43625Aminoglycoside resistanceStreptomycin100
ant(3)-IaX02340Warning: gene is missing from note files. Please inform curator.81.48148148
aph(3)-IaX62115Aminoglycoside resistanceStreptomycin100
aph(3)-IbAF321550Aminoglycoside resistance alternate name; aph(3)-IbStreptomycin100
aph(3)VIaX07753Aminoglycoside resistanceAmikacin100
aph(6)-IdM28829Aminoglycoside resistance alternate name; aph(6)-IdStreptomycin100
armAAY220558Aminoglycoside resistanceStreptomycin100
ARR-2HQ141279Rifampicin resistanceStreptomycin100
blaADC-25EF016355Beta-lactam resistanceAmikacin; gentamicin; tobramycin100
blaCARB-14JQ364968Warning: gene is missing from note files. Please inform curator.100
blaCTXM-124JQ429324Beta-lactam resistance100
blaCTXM-15AY044436Beta-lactam resistance alternate name; UOE-1Ampicillin; amoxicillin; piperacillin100
blaNDM-1FN396876Beta-lactam resistanceAmoxicillin; ampicillin; aztreonam; cefepime; cefotaxime; ceftazidime; ceftriaxone; piperacillin; ticarcillin100
blaOXA-235JQ820240Beta-lactam resistanceAmoxicillin; amoxicillin+clavulanic acid; ampicillin; ampicillin+clavulanic acid; cefepime; cefixime; cefotaxime; cefoxitin; ceftazidime; ertapenem; imipenem; Meropenem; piperacillin; piperacillin+tazobactam100
blaOXA-239JQ837239Beta-lactam resistance100
blaOXA-371AB871653Beta-lactam resistanceAmoxicillin; +clavulanic acid; ampicillin; +clavulanic_; ceftazidime; piperacillin100
blaOXA-402JX865391Warning: gene is missing from note files. Please inform curator.100
blaOXA-64AY750907Beta-lactam resistanceImipenem; meropenem100
blaOXA-65AY750908Beta-lactam resistanceAmoxicillin; ampicillin; cefoxitin; imipenem; meropenem; piperacillin; piperacillin+tazobactam100
blaPER-1GU944725Beta-lactam resistance100
blaPER-7HQ713678Beta-lactam resistanceAmoxicillin; ampicillin100
blaTEM1AHM749966Beta-lactam resistance alternate name; RblaTEM-1100
catA1V00622Phenicol resistanceAmoxicillin; ampicillin; cephalothin; piperacillin; ticarcillin100
catB8AF227506Phenicol resistanceChloramphenicol100
cmlA1M64556Phenicol resistanceTrimethoprim99.91769547
dfrA1X00926Trimethoprim resistanceChloramphenicol; florfenicol100
floRAF118107Phenicol resistanceErythromycin100
Mph(E)DQ839391Macrolide resistance100
Msr(E)FR751518Macrolide, lincosamide, and streptogramin B resistanceSulfamethoxazole100
qacEX68232Disinfectant resistanceDoxycycline; tetracycline100
sul1U12338Sulphonamide resistanceDoxycycline; tetracycline; minocycline100
Tet(A)AJ517790Tetracycline resistanceDoxycycline; tetracycline100