Research Article
[Retracted] Characterization of Tumor Mutation Burden-Based Gene Signature and Molecular Subtypes to Assist Precision Treatment in Gastric Cancer
Table 2
The first 20 upregulated genes in high-TMB than low-TMB groups.
| Gene | Mean value | Logfold-change | value | FDR | Low-TMB group () | High-TMB group () |
| C8G | 1.808 | 7.266 | 2.007 | 0.025 | 0.045 | LEFTY1 | 2.634 | 10.220 | 1.956 | 0.014 | 0.027 | HOXA9 | 0.656 | 2.431 | 1.889 | 5.35-08 | 7.06-07 | PIWIL1 | 0.645 | 1.805 | 1.485 | 3.07-07 | 3.05-06 | HOXA11 | 1.131 | 3.092 | 1.451 | 4.48-12 | 4.46-10 | SEMG1 | 0.842 | 2.247 | 1.416 | 0.008 | 0.018 | NXPH4 | 1.901 | 4.911 | 1.370 | 0.0004 | 0.001 | TNFSF9 | 3.366 | 8.151 | 1.276 | 0.0004 | 0.001 | GPA33 | 8.997 | 20.799 | 1.209 | 1.71-05 | 8.84-05 | SPDYC | 0.934 | 2.124 | 1.185 | 2.67-06 | 1.85-05 | PPP1R1B | 32.777 | 72.955 | 1.154 | 1.08-05 | 5.99-05 | CT83 | 4.971 | 10.594 | 1.092 | 0.0001 | 0.0004 | ZIC2 | 1.603 | 3.400 | 1.085 | 2.78-05 | 0.0001 | HOXA10 | 2.724 | 5.693 | 1.063 | 2.24-12 | 2.78-10 | CDC6 | 7.140 | 14.790 | 1.051 | 1.04-07 | 1.22-06 | HOXA13 | 3.135 | 6.419 | 1.034 | 7.85-09 | 1.48-07 | RPL22L1 | 17.473 | 35.002 | 1.002 | 1.53-05 | 8.05-05 | C2CD4A | 3.873 | 7.674 | 0.986 | 4.39-05 | 0.0002 | EFNA3 | 4.540 | 8.868 | 0.966 | 5.90-08 | 7.69-07 |
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