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| Features | Description |
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| Reversely mapped read (RMR) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| Reversely mapped read showing SM (RMSM) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is -1 |
| Reversely mapped read showing MS (RMMS) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is -1 |
| Mapped read showing SM (MSM) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| Mapped read showing MS (MMS) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| The mapped distance between the paired-end reads smaller than insert size (MDS) | If such paired-end reads exist on one genome site, the value of this feature on the site is 1; otherwise, it is -1 |
| The mapped distance between the paired-end reads equal to insert size (MDE) | If such paired-end reads exist g on one genome site, the value of this feature on the site is 1; otherwise, it is -1 |
| The mapped distance between the paired-end reads larger than insert size (MDL) | If such paired-end reads exist on one genome site, the value of this feature on the site is 1; otherwise, it is -1 |
| Previous breakpoint site with mapped reads showing SM (PSM) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| Previous breakpoint site with mapped reads showing MS (PMS) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| Next breakpoint site with mapped reads showing SM (NSM) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
| Next breakpoint site with mapped reads showing MS (NMS) | If such read exists on one genome site, the value of this feature on the site is 1; otherwise, it is 0 |
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