Research Article
MicroRNA-Based Markers of Oral Tongue Squamous Cell Carcinoma and Buccal Squamous Cell Carcinoma: A Systems Biology Approach
Table 2
A total of 96 nodes demonstrated high centrality values in the PPI network associated with OTSCC and BSCC and considered hub genes.
| | Gene symbols | Degrees | Betweenness | Closeness |
| | MYC | 149 | 0.076 | 0.483 | | HSP90AA1 | 130 | 0.060 | 0.472 | | HSPA5 | 78 | 0.033 | 0.435 | | PTEN | 106 | 0.032 | 0.449 | | FN1 | 88 | 0.026 | 0.425 | | MDM2 | 76 | 0.026 | 0.432 | | MAPT | 65 | 0.025 | 0.427 | | MAPK1 | 76 | 0.023 | 0.431 | | SMAD4 | 73 | 0.018 | 0.418 | | RAC1 | 62 | 0.018 | 0.410 | | GSK3B | 72 | 0.017 | 0.427 | | CCNB1 | 59 | 0.017 | 0.416 | | CUL1 | 48 | 0.017 | 0.398 | | CCND1 | 84 | 0.016 | 0.428 | | ARF1 | 37 | 0.016 | 0.382 | | FOS | 62 | 0.016 | 0.416 | | HIF1A | 75 | 0.016 | 0.428 | | HIST2H2BE | 67 | 0.016 | 0.414 | | HNRNPC | 75 | 0.015 | 0.417 | | CANX | 44 | 0.015 | 0.396 | | NCL | 62 | 0.014 | 0.414 | | CAV1 | 57 | 0.014 | 0.414 | | PPP1CB | 49 | 0.014 | 0.407 | | G3BP1 | 55 | 0.014 | 0.409 | | GRIA2 | 43 | 0.013 | 0.390 | | HUWE1 | 46 | 0.013 | 0.401 | | FMR1 | 49 | 0.013 | 0.409 | | DICER1 | 51 | 0.012 | 0.402 | | PUM2 | 41 | 0.012 | 0.385 | | STAT1 | 51 | 0.012 | 0.406 | | IGF1R | 54 | 0.012 | 0.419 | | NRXN1 | 39 | 0.011 | 0.379 | | NTRK2 | 38 | 0.011 | 0.389 | | SRSF1 | 68 | 0.011 | 0.407 | | RANBP2 | 43 | 0.011 | 0.395 | | UBE3A | 41 | 0.011 | 0.403 | | DDX5 | 52 | 0.011 | 0.400 | | SEC13 | 41 | 0.011 | 0.384 | | UBE4B | 30 | 0.011 | 0.375 | | PTPN11 | 46 | 0.010 | 0.399 | | P4HB | 41 | 0.010 | 0.389 | | IQGAP1 | 48 | 0.010 | 0.406 | | TRIP12 | 36 | 0.010 | 0.384 | | HNRNPH1 | 56 | 0.010 | 0.393 | | YWHAG | 34 | 0.010 | 0.393 | | CYCS | 49 | 0.009 | 0.411 | | HNRNPD | 51 | 0.009 | 0.398 | | YAP1 | 44 | 0.009 | 0.395 | | DHX15 | 56 | 0.009 | 0.387 | | VCL | 41 | 0.009 | 0.384 | | QKI | 33 | 0.009 | 0.387 | | DDB1 | 40 | 0.009 | 0.392 | | CRK | 35 | 0.009 | 0.386 | | RAN | 43 | 0.009 | 0.387 | | XRCC5 | 44 | 0.008 | 0.396 | | SNRPF | 45 | 0.008 | 0.371 | | EIF2S1 | 43 | 0.008 | 0.400 | | CD44 | 57 | 0.008 | 0.402 | | TLR4 | 48 | 0.008 | 0.397 | | CHD4 | 56 | 0.008 | 0.391 | | CFL1 | 39 | 0.008 | 0.392 | | KDM6A | 42 | 0.008 | 0.391 | | H2AFV | 42 | 0.008 | 0.379 | | CALR | 40 | 0.008 | 0.399 | | PPP2R1A | 35 | 0.008 | 0.397 | | USP9X | 36 | 0.007 | 0.390 | | XIAP | 42 | 0.007 | 0.404 | | DDX17 | 45 | 0.007 | 0.394 | | MATR3 | 46 | 0.007 | 0.393 | | SP1 | 36 | 0.007 | 0.391 | | SOD1 | 36 | 0.007 | 0.399 | | HNRNPDL | 48 | 0.007 | 0.392 | | PTGES3 | 37 | 0.007 | 0.390 | | PRPF8 | 46 | 0.007 | 0.380 | | SKIV2L2 | 43 | 0.007 | 0.364 | | PUM1 | 35 | 0.007 | 0.370 | | TRRAP | 36 | 0.007 | 0.383 | | EWSR1 | 43 | 0.007 | 0.398 | | NEDD4 | 30 | 0.006 | 0.384 | | FLNA | 44 | 0.006 | 0.390 | | UBQLN2 | 38 | 0.006 | 0.394 | | PKM | 35 | 0.006 | 0.396 | | WDR82 | 35 | 0.006 | 0.374 | | RBFOX1 | 29 | 0.006 | 0.364 | | MYH9 | 31 | 0.006 | 0.379 | | KPNA2 | 35 | 0.005 | 0.391 | | AKT3 | 29 | 0.005 | 0.383 | | ATRX | 41 | 0.005 | 0.384 | | TGFBR2 | 38 | 0.005 | 0.387 | | MMP2 | 47 | 0.005 | 0.385 | | MBNL1 | 30 | 0.005 | 0.368 | | TCP1 | 33 | 0.005 | 0.381 | | EIF3A | 31 | 0.005 | 0.364 | | ANXA5 | 50 | 0.005 | 0.412 | | MMP9 | 52 | 0.005 | 0.400 | | SMARCB1 | 41 | 0.005 | 0.389 |
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PPI, protein-protein interaction; OTSCC, oral tongue squamous cell carcinoma; BSCC, buccal squamous cell carcinoma.
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