Canadian Journal of Infectious Diseases and Medical Microbiology

Research Article

Detection of Antimicrobial Resistance Genes Associated with Carbapenem Resistance from the Whole-Genome Sequence of Acinetobacter baumannii Isolates from Malaysia

Table 2

Resistance genes present in carbapenem-resistant A. baumannii from year 2011–2016.
Strain IDStateSourceOxford MLSTClonal assignedblaTEMblaPERblaOXA-23blaOXA-51-likeblaNDMblaADCblaCARBMobile genetic elementsTransposons
blaOXA-66blaOXA-91blaOXA-64ISAba1-ADCISAba1‐OXA23‐likeISAba1‐OXA51‐likeISAba125-NDMTn2006Tn2007Tn2008Tn2009
CRE1071/16KelantanPusST195CC92/IC2−−++−−−+−+++−+−+−
CRE1159/16SelangorUrineST195CC92/IC2−−++−−−+−+++−+−+−
CRE157/16PerakUrineST195CC92/IC2−−++−−−+−++−−+−+−
CRE158/16PerakETTST195CC92/IC2+−++−−−+−++−−+−+−
CRE245/15Kuala LumpurRectal SwabST938CC92/IC2−−++−−−+−+++−+−+−
CRE341/15Kuala LumpurUrineST1947CC229−++−−+++−−+−++−+−
CRE400/16PerakETTST938CC92/IC2+−++−−−+−+++−+−+−
CRE449/14PahangETTST1948CC92/IC2+−++−−++−+++++−+−
CRE596/14Kuala LumpurETTST208CC92/IC2+−++−−−+−+++−+−+−
CRE645/15PerakRectal SwabST208CC92/IC2+−++−−−+−+++−+−+−
CRE648/15Kuala LumpurETTST208CC92/IC2+−++−−−+−+++−+−+−
CRE85/16PahangUrineST1418CC234−−+−+−+++−++++−+−
CRE98/14SarawakETTST195CC92/IC2+−++−−−+−+++−+−+−
+indicates the presence of the resistant gene. MLST sequence type (ST) along with clonal complex is included in the table. blaOXA, blaNDM, blaADC, blaTEM, and blaPER are the β-lactamase genes identified. IS: mobile genetic element-insertion sequence; Tn: transposon; ETT: endotracheal tube.