Research Article
PPI-GA: A Novel Clustering Algorithm to Identify Protein Complexes within Protein-Protein Interaction Networks Using Genetic Algorithm
Table 13
Some clusters in the Collins network with the lowest p value with GO component.
| | Size | GO-ID/GO-term | P value | N% |
| | 1 | 17 | “GO:0030880/RNA polymerase complex” | 3.30986E-39 | 100% | | 2 | 8 | “GO:0044428/Nuclear part” | 3.70274E-05 | 100% | | 3 | 27 | “GO:0005739/Mitochondrion” | 9.82318E-22 | 100% | | 4 | 18 | “GO:0000502/Proteasome complex” | 1.76807E-40 | 100% | | 5 | 7 | “GO:0030008/TRAPP complex” | 1.02802E-20 | 100% | | 6 | 10 | “GO:0044425/Membrane part” | 4.18992E-10 | 100% | | 7 | 5 | “GO:0035097/Histone methyl–transferees complex” | 1.31389E-11 | 100% | | 8 | 5 | “GO:0030126/COPI vesicle coat” | 1.18247E-14 | 100% | | 9 | 15 | “GO:0000502/Proteasome complex” | 2.20275E-33 | 100% | | 10 | 12 | “GO:0016514/SWI/SNF complex” | 4.98150E-37 | 100% | | 11 | 60 | “GO:0005634/Nucleus” | 2.15384E-32 | 100% | | 12 | 81 | “GO:0043227/Membrane-bound organelle” | 4.87516E-23 | 98.4% | | 13 | 63 | “GO:0044464/Cell part” | 3.42642E-05 | 95.4% | | 14 | 4 | “GO:0031011/INO80 complex” | 4.13601E-07 | 79.0% |
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