Optimizing Biomedical Ontology Alignment through a Compact Multiobjective Particle Swarm Optimization Algorithm Driven by Knee Solution

Table 2

Friedman’s test on the alignment’s quality. Each value represents the f-measure, and the number in round parentheses is the corresponding computed rank.

	Anatomy	FMA-NCI	FMA-SNOMED	NCI-SNOMED	HP-MP	DOID-ORDO	Average
AML [27]	0.94 (1.5)	0.93 (1.5)	0.83 (2)	0.80 (2)	0.84 (3)	0.64 (7)	0.83 (2.83)
LogMap [28]	0.89 (4)	0.92 (3)	0.79 (3)	0.77 (3)	0.85 (2)	0.84 (2)	0.84 (2.83)
XMap [29]	0.89 (4)	0.86 (5.5)	0.77 (4)	0.69 (4)	0.47 (8.5)	0.70 (6)	0.73 (2.33)
DOME [30]	0.76 (6)	0.86 (5.5)	0.33 (9)	0.64 (6)	0.47 (8.5)	0.60 (9)	0.61 (7.33)
POMAP++ [31]	0.89 (4)	0.88 (4)	0.40 (8)	0.68 (5)	0.68 (6)	0.83 (3)	0.73 (5.00)
EA [8]	0.68 (9)	0.73 (8)	0.64 (6)	0.53 (8)	0.70 (5)	0.61 (8)	0.65 (7.33)
ABC [6]	0.72 (7)	0.75 (7)	0.64 (6)	0.62 (7)	0.62 (7)	0.72 (5)	0.68 (6.50)
PSO [10]	0.70 (8)	0.72 (9)	0.64 (6)	0.51 (9)	0.72 (4)	0.75 (4)	0.67 (6.67)
CMPSO-K	0.94 (1.5)	0.93 (1.5)	0.85 (1)	0.82 (1)	0.86 (1)	0.86 (1)	0.88 (1.17)