Research Article

Molecular Composition of Genomic TMPRSS2-ERG Rearrangements in Prostate Cancer

Table 1

Patient characteristics and genomic breakpoint positions.

Patient IDAge at diagnosis (y)Gleason scoreBreak position (GRCh37/hg19)Filler (bp)Microhomology (bp)
TMPRSS2ERG

UPN01566chr21:42,869,431chr21:39,882,94201
UPN02597chr21:42,873,985chr21:39,853,57201
UPN03597chr21:42,869,696chr21:39,829,922 (inversion 43 bp)05
UPN04605chr21:42,873,983chr21:39,893,34201
UPN05617chr21:42,871,961chr21:39,878,09001
UPN06627chr21:42,871,305chr21:39,864,40130
UPN07636chr21:42,868,091chr21:39,866,57700
UPN08646chr21:42,872,946chr21:39,870,46940
UPN09657chr21:42,868,907chr21:39,829,21620
UPN10667chr21:42,874,680chr21:39,864,86900
UPN11669chr21:42,872,341chr21:39,877,04101
UPN12679chr21:42,876,941chr21:39,878,53100
UPN13685chr21:42,869,152chr21:39,859,80302
UPN14686chr21:42,874,909chr21:39,875,81801
UPN15687chr21:42,870,630chr21:39,869,68700
UPN16697chr21:42,873,489chr21:39,803,65803
UPN17698chr21:42,865,245chr21:39,835,82200
UPN18698chr21:42,868,095chr21:39,950,28900
UPN19708chr21:42,868,866chr21:39,878,04510
UPN20709chr21:42,870,028chr21:39,885,07407
UPN21727chr21:42,868,434chr21:39,867,27301
UPN22729chr21:42,872,857chr21:39,862,07200
UPN23737chr21:42,867,920chr21:39,868,18301
UPN24747chr21:42,869,364chr21:39,930,90201
VCap cell linen.a.n.a.chr21:42,871,953chr21:39,876,353 (inversion 81 bp)40

n.a.: not available.