Abstract

Objective. Uncovering genetic and immunologic tumor features is critical to gain insights into the mechanisms of immunotherapeutic response. Herein, this study observed the functions of CXCR2 in prognosis and immunology of ovarian cancer. Methods. Expression, prognostic significance, and genetic mutations of CXCR2 were analyzed in diverse cancer types based on TCGA and GTEx datasets. Associations of CXCR2 expression with immune checkpoints, neoantigens, tumor mutational burden (TMB), and microsatellite instability (MSI) were evaluated across pancancer. CXCR2-relevant genes were identified, and their biological functions were investigated in ovarian cancer. Through three algorithms (TIMER, quanTIseq, and xCell), we assessed the relationships of CXCR2 with immune cell infiltration in ovarian cancer. GSEA was adopted for inferring KEGG and hallmark pathways involved in CXCR2. Results. CXCR2 presented abnormal expression in tumors than paired normal tissues across pancancer. Higher expression of CXCR2 was found in ovarian cancer. Moreover, its expression was in relation to overall survival and progression including ovarian cancer. Prominent associations of CXCR2 with immune checkpoints, neoantigens, TMB, and MSI were observed in human cancers. Somatic mutations of CXCR2 frequently occurred across pancancer. Amplification was the main mutational type of CXCR2 in ovarian cancer. CXCR2-relevant genes were markedly enriched in immunity activation and carcinogenic pathways in ovarian cancer. Moreover, it participated in modulating immune cell infiltration in the tumor microenvironment of ovarian cancer such as macrophage and immune response was prominently modulated by CXCR2. Conclusion. Collectively, CXCR2 acts as a promising prognostic and immunological biomarker as well as a novel immunotherapeutic target of ovarian cancer.

1. Introduction

Ovarian cancer represents the major cause of deaths of gynecological malignancies [1, 2]. Epithelial ovarian cancer is the most common form [3]. The five-year survival rate is <35% globally [3]. 70% of affected patients have advanced-stage disease [4]. The present first-line standards of care include debulking surgery plus platinum–taxane maintenance chemotherapeutic strategy [5]. Following the first-line treatment, cancer may relapse among 60–70% of patients with first-rank debulking as well as 80–85% of patients with suboptimal debulking [6]. The high mortality of ovarian cancer patients can be attributed to chemotherapy resistance, extensive intraperitoneal metastasis, and other factors [7]. Awful mortality may be attributed chemotherapeutic resistance, extensive intraperitoneal metastases, etc. [8]. Tumor microenvironment exerts a critical role in the progression and clinical outcomes of ovarian cancer [9]. Emerging immunotherapeutic strategies enhance the antitumor immune response by diverse methods such as immunostimulatory cytokine and tumor antigen vaccine as well as monoclonal antibody [10]. Though immunotherapy-relevant agents like olaparib may ameliorate ovarian cancer progression, there is no prominent breakthrough for its effective therapy [11]. The presence and absence of tumor-infiltrating lymphocytes are separately judged as “hot” tumor and “cold” tumor [12]. Therefore, because of high infiltration levels of tumor-infiltrating lymphocytes, “hot” tumor can respond to immunosuppressive checkpoint inhibitors. Nevertheless, despite the relatively increased tumor mutation burden (TMB) of ovarian cancer, it is still a “cold” tumor [13]. Thus, it is of importance to explore how to activate the immune system in “cold” tumor such as T cell and tumor-associated macrophage.

Chemokine receptor (CXCR) family (including CXCR1-7) is a type of G-protein-coupled receptors, abundant in 7 transmembrane motifs containing hydrophobic amino acids [14]. Among them, CXCR2 was originally thought to be a G protein-coupled transmembrane chemokine receptor expressed on neutrophil [15]. It possesses the functions in various leukocytes such as neutrophil, eosinophil, and monocyte as well as macrophage, which is related to immune response [16]. Targeting CXCR2 in myeloid-derived suppressor cells may improve antitumor immune response [17]. Emerging evidence suggests that CXCR2 is involved in the recruitment of immune cells as well as promotes angiogenesis, tumor growth, and metastases [18]. It exhibits high affinity for IL-8 and Gro-1 but low affinity for Gro-2, Gro-3, and epithelial neutrophil-activating peptide-78 [18]. Moreover, high expression of CXCR2 contributes to carcinogenesis in diverse cancer types, especially ovarian cancer [19]. Also, CXCR2-expressing ovarian cancer is aggressive with undesirable clinical outcomes [20]. CXCR2 is crucial for the acquisition of cisplatin chemoresistance of ovarian cancer cells [21]. Despite this, the functions of CXCR2 in prognosis and immunology in ovarian cancer remain ambiguous. In this study, we aimed to evaluate the prognostic and immunological significance of CXCR2 in ovarian cancer.

2. Materials and Methods

2.1. Data Acquisition

This study acquired the transcriptome data, follow-up information, and genetic mutation data of pancancer samples from The Cancer Genome Atlas (TCGA) project via Genomic Data Commons (GDC) web server [22]. Meanwhile, we curated transcriptome profiles of normal specimens from Genotype-Tissue Expression (GTEx) projects [23]. Gene Expression Profiling Interactive Analysis 2 (GEPIA2) web server (http://gepia2.cancer-pku.cn/) provides an accessible resource for gene expression analysis in tumor and normal specimens from TCGA and GTEx projects. CXCR2 expression was compared between tumor and normal specimens with the Wilcoxon test. “Survival” module of GEPIA was applied for assessing the correlations of CXCR2 expression with overall survival (OS) of diverse cancer types. CXCR2 expression was analyzed across distinct cancer pathological stages. Univariate cox regression analyses were presented for investigating the associations of CXCR2 expression with OS and disease-specific survival (DSS) for diverse cancer types in TCGA cohort.

2.2. Analysis of Associations between CXCR2 Expression and Immune Checkpoints, Neoantigens, TMB, and Microsatellite Instability (MSI)

The known immune checkpoints were curated from previous research [24]. TMB was calculated as the number of somatic, coding, base substitutions, and insert-deletion alterations per megabase of the genome detected utilizing nonsynonymous and code-shifting indels with the detection limit of 5% [25]. The formula of TMB was as follows: , where Sn represented the absolute number of somatic alterations while represented the number of exon base coverage . The number of neoantigens [26] as well as MSI [27] was separately counted across pancancer. Through the Spearman correlation test, we assessed the associations of CXCR2 expression with immune checkpoints, neoantigens, TMB, and MSI in diverse cancer types.

2.3. Somatic Mutation Analysis

Somatic mutations were visualized across ovarian cancer specimens from TCGA dataset utilizing Maftools package [28]. Through cBio Cancer Genomics Portal (cBioPortal) platform (http://cbioportal.org/) [29], alteration frequency of CXCR2 was analyzed in diverse cancer types. Genomic mutations of CXCR2 contained copy number amplification, deep deletion, and missense mutation.

2.4. Differential Expression Analysis

In line with the median value of CXCR2 expression, ovarian cancer specimens in TCGA dataset were classified into high- and low-expression groups. Limma package (version 3.40.2) was adopted for differential expression analysis between two groups [30]. With and , CXCR2-relevant genes were identified in ovarian cancer.

2.5. Function Enrichment Analysis

Biological processes of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enriched by CXCR2-relevant genes were analyzed with clusterProfiler package [31]. Terms with were significantly enriched.

2.6. Analysis of Immune Cell Infiltration

Three algorithms including Tumor Immune Estimation Resource (TIMER; http://cistrome.shinyapps.io/timer) [32], quanTIseq (http://icbi.at/quantiseq) [33], and xCell (http://xCell.ucsf.edu/) [34] were employed for inferring the infiltration levels of immune cells in ovarian cancer from TCGA dataset. The Spearman correlation test was utilized to evaluate the relationships of CXCR2 expression with immune cell infiltrations.

2.7. Gene Set Enrichment Analysis (GSEA)

For exploring the biological signaling pathways involved in CXCR2, GSEA software (version 4.0.3) [35] was adopted carried out between high- and low-expression groups with the median value of CXCR2 expression as the cutoff value. The first three or four terms of KEGG and hallmark were visualized. The gene sets of KEGG and hallmark pathways were curated from the Molecular Signature Database (MsigDB; http://www.broadinstitute.org/msigdb) [36]. KEGG or hallmark pathways with and nominal were considered to have significant enrichment.

2.8. Statistical Analysis

All statistics were presented with R software (version 4.0.3; https://www.R-project.org) and its packages. Comparisons between groups were conducted with Student’s -test, the Wilcoxon test, or one-way variance analyses. The Spearman or Pearson correlation test was utilized for evaluating correlations between variables. A value < 0.05 was set as statistically significant.

3. Results

3.1. Expression Patterns of CXCR2 across Pancancer

Herein, this study evaluated the expression of CXCR2 in diverse tumor tissues and matched normal tissues. We collected data from TCGA and GTEx datasets. In TCGA dataset, we noticed high expression of CXCR2 in COAD, GBM, KIRC, and LGG (Figure 1(a)). In contrast, CXCR2 displayed reduced expression in BLCA, BRCA, HNSC, KICH, LIHC, LUAD, PAAD, PRAD, and STAD. Due to the relatively small sample size of normal tissues in TCGA, we integrated data from TCGA and GTEx datasets. There was reduced expression of CXCR2 in BLCA, BRCA, COAD, GBM, HNSC, LIHC, LUAD, LUSC, PRAD, and SKCM (Figure 1(b)). Nevertheless, upregulation of CXCR2 expression was found in KIRC, LAML, LGG, OV, PAAD, STAD, and TGCT. Using the GEPIA2 tool, the relationships of CXCR2 expression with pathological staging were evaluated in CHOL, COAD, ESCA, KIRC, OV, PAAD, READ, and STAD (Figure 1(c)). Among them, CXCR2 displayed stage-specific expression alterations in STAD, while no clear associations were found in most cancer types.

3.2. Prognostic Significance of CXCR2 across Pancancer

Through the GEPIA2 tool, we investigated the associations of CXCR2 with OS across diverse cancer types. The results demonstrated that CXCR2 upregulation was in relation to worse OS of OV and LGG patients (Figures 2(a)2(c)). Oppositely, KIRC patients with high expression of CXCR2 displayed marked survival advantage in comparison to those with low expression of CXCR2 (Figure 2(d)). Furthermore, univariate cox regression models were conducted for investigating the correlations of CXCR2 with OS and DSS in each cancer type. In Figure 2(e), we noticed CXCR2 as a risk factor for OS of ACC, DLBC, LAML, LGG, OV, and STAD. In contrast, CXCR2 acted as a protective factor of MESO OS. Moreover, CXCR2 upregulation displayed worse DSS for ACC, DLBC, LGG, OV, and STAD (Figure 2(f)). Kaplan-Meier curves also demonstrated the prognostic significance of CXCR2 in OS and DSS of diverse cancer types (Supplementary figure 1A, B).

3.3. Analysis of Links between CXCR2 Expression and Tumor Immune Response across Pancancer

Nowadays, several genes have been recognized as immune checkpoints in tumor immune response. We evaluated whether there is a link of CXCR2 with immune checkpoint genes. The results demonstrated markedly positive associations between CXCR2 and immune checkpoint genes such as CD86, VSIR, CD28, and CTLA4 across pancancer (Figure 3(a)). For uncovering the function of CXCR2 in the immune mechanism and immune response, this study evaluated the interactions of CXCR2 expression with neoantigens, TMB, and MSI. Neoantigens, TMB, and MSI are in relation to antitumor immunity and may predict therapeutic responses to immunotherapeutic agents. Correlation between CXCR2 expression and neoantigens was assessed in diverse cancer types. In Figure 3(b), CXCR2 exhibited prominently negative associations with the number of neoantigens in BRCA, SKCM, BLCA, and PRAD. Moreover, we noticed the negative links of CXCR2 expression with TMB in BLCA, BRCA, LIHC, LUAD, PAAD, PRAD, and THCA (Figure 3(c)). However, CXCR2 expression displayed positive correlations to TMB in LGG and OV. As depicted in Figure 3(d), there were negative interactions between CXCR2 expression and MSI in CHOL, ESCA, HNSC, KIRP, LGG, LUAD, LUSC, PAAD, PRAD, SKCM, STAD, UCEC, and UCS. The above evidence highlighted the implications of CXCR2 expression in tumor immune response.

3.4. Analysis of Somatic Mutation of CXCR2 in Ovarian Cancer

We analyzed the somatic mutation of CXCR2 in ovarian cancer. As shown in Figure 4(a), the somatic mutation rate was 0.46%. Among 436 ovarian cancer samples, genetic mutations occurred in 261 (59.86%) (Figure 4(b)). TP53 (56%), TTN (23%), CSMD3 (8%), MUC16 (7%), FLG (6%), FAT3 (6%), DNAH3 (5%), SYNE1 (5%), USH2A (5%), and HMCN1 (4%) were the most frequently mutated genes across ovarian cancer. Moreover, missense mutation was the major mutation type. However, no significant difference in genetic mutation was investigated between high and low expression of CXCR2 groups. Through cBioPortal tool, we evaluated the genetic mutation of CXCR2 across pancancer. We noticed that amplification of CXCR2 occupied the relatively high alteration frequency in ovarian cancer, which could contribute to the upregulation of CXCR2 expression (Figure 4(c)).

3.5. Identifying CXCR2-Relevant Genes and Their Biological Significance

To identify CXCR2-relevant genes, we separated ovarian cancer patients into high- and low-expression groups in line with the median value of CXCR2 expression. With and , we screened 734 CXCR2-relevant genes (Figures 5(a) and 5(b)). Among them, 715 genes were upregulated while 19 genes were downregulated in the high-expression group (Tables 1 and 2). Function enrichment analysis was presented for uncovering the biological significance of CXCR2-relevant genes. In Table 3 and Figure 5(c), upregulated genes were in relation to KEGG pathways of immunity and inflammatory response such as Th17 cell differentiation, cytokine-cytokine receptor interaction, chemokine signaling pathway, antigen processing and presentation, human T cell leukemia virus 1 infection, graft-versus-host disease, and allograft rejection. Meanwhile, upregulated genes were prominently enriched by immune response like regulation of mononuclear, lymphocyte, and leukocyte proliferation; leukocyte cell-cell adhesion; T cell activation; myeloid leukocyte migration; neutrophil degranulation; and neutrophil activation involved in immune response (Table 4 and Figure 5(c)). Intriguingly, downregulated genes displayed significant correlations to carcinogenic pathways such as PPAR signaling pathway, neuroactive ligand-receptor interaction, melanoma, gastric cancer, cell adhesion molecules, and breast cancer (Table 5 and Figure 5(c)). Also, we noticed that downregulated genes were markedly associated with metabolic processes like triglyceride metabolic and catabolic processes, neutral lipid metabolic and catabolic processes, glycerolipid catabolic process, and acylglycerol metabolic and catabolic processes (Table 6 and Figure 5(c)).

3.6. Associations of CXCR2 with Immune Cell Infiltration in Tumor Microenvironment

Three algorithms (TIMER, quanTIseq, and xCell) were adopted for inferring the infiltration levels of immune cells in ovarian cancer. In Figure 6(a), correlation analysis uncovered that CXCR2 was negatively associated with the abundance of CD4+ T cell, neutrophil, myeloid dendritic cell, and macrophage in ovarian cancer tissues with TIMER algorithm. Using a quanTIseq method, we noticed the negative associations of CXCR2 with T regulatory cell (Treg), M1 macrophage, and M2 macrophage (Figure 6(b)). Oppositely, there were positive correlations of CXCR2 with uncharacterized cell and CD4+ T cell. Through xCell algorithm, we investigated that CXCR2 displayed negative associations with stromal score, microenvironment score, immune score, CD8+ effector memory T cell, CD4+ naïve T cell, CD4+ effector memory T cell, neutrophil, activated myeloid dendritic cell, myeloid dendritic cell, monocyte, M1 macrophage, M2 macrophage, macrophage, hematopoietic stem cell, granulocyte-monocyte progenitor, endothelial cell, and common myeloid progenitor (Figure 6(c)). In contrast, we noticed the positive associations of CXCR2 with the abundance of CD8+ naïve T cell, CD4+ central memory T cell, CD4+ Th2 T cell, CD4+ Th1 T cell, common lymphoid progenitor, and B cell plasma across ovarian cancer. Based on three algorithms, CXCR2 expression negatively modulated macrophage infiltration in ovarian cancer.

3.7. Analysis of Signaling Pathways Involved in CXCR2

For observing the function of CXCR2 expression on tumor progression, this study separated ovarian cancer specimens into high- and low-expression groups in line with CXCR2 expression. Afterwards, we evaluated the enrichment of KEGG and hallmark pathways in high- and low-expression groups via GSEA. Our data suggested that CXCR2 exhibited negative correlations to leishmania infection, chemokine signaling pathway, and cytokine-cytokine receptor interaction KEGG pathways (Figure 7(a)). Meanwhile, there were positive relationships of CXCR2 with homologous recombination, base excision repair, proteasome, and DNA replication (Figure 7(b)). As depicted in Figure 7(c), hallmark pathways of inflammatory response, complement, and KRAS signaling up displayed negative interactions with CXCR2. In contrast, CXCR2 was in positive relation to MYC targets v1, base excision repair, proteasome, and DNA replication (Figure 7(d)).

4. Discussion

Based on TCGA and GTEx datasets, we observed the abnormal expression of CXCR2 in tumors and paired normal tissues across pancancer. Survival analysis uncovered the prominent prognostic significance of CXCR2 in diverse cancer types. Especially, CXCR2 expression presented marked upregulation in ovarian cancer as well as its upregulation contributed to more undesirable survival outcomes. Hence, CXCR2 might act as a promising prognostic predictor of ovarian cancer. The response of ovarian cancer to immunotherapeutic agents remains limited. Although immunotherapy may produce a long-lasting response in a few patients, most of the patients do not respond to this therapy, covering those with PD-L1-expressed tumors [37]. Nevertheless, evaluating the sensitivity or resistance to target therapeutic populations according to stratification by cancer markers including TMB, PD-L1, tumor-infiltrating lymphocytes, and neoantigens can enhance the predictive efficacy of immunotherapeutic response [38]. Our pancancer analysis demonstrated the close interactions of CXCR2 with immune checkpoints, neoantigen, TMB, and MSI, indicating that CXCR2 could participate in modulating immune response. Our genetic mutation analysis uncovered that there occurred widespread mutations of CXCR2 across pancancer. Amplification was the major mutational type of CXCR2 in ovarian cancer. This indicated that CXCR2 amplification contributed to its overexpression in ovarian cancer.

Under the cutoffs of and , we identified 734 CXCR2-relevant genes. We noticed that CXCR2-relevant genes were markedly enriched in immunity activation such as Th17 cell differentiation, cytokine-cytokine receptor interaction, chemokine signaling pathway, and antigen processing and presentation as well as carcinogenic pathways such as PPAR signaling pathway. For instance, PARP inhibitor has emerged as a therapeutic agent against ovarian cancer according to the DNA repair vulnerability in ovarian cancer cells, which prevents the repair of DNA single-strand break as well as has generated double-strand break that is unable to be precisely repaired in tumor cells [39].

Based on three algorithms (TIMER, quanTIseq, and xCell), we noticed the prominent interaction between CXCR2 and macrophage in ovarian cancer tissues. Macrophage constitutes a key component of the tumor microenvironment [13]. Tumor-associated macrophage is macrophage produced by the infiltrations of peripheral blood mononuclear cells into solid tumor tissues, occupying a large part of tumor stromal cells [13]. Because of the increased plasticity and heterogeneity of macrophage, it has distinct biological functions in diverse tumor microenvironment, including two major phenotypes: M1 and M2 macrophages [40]. Tumor-associated macrophage is abundant in the ovarian cancer microenvironment and affects patients’ survival outcomes [40]. The relationship of CXCR2 with macrophage has been reported in several cancer types. For instance, macrophage reeducation by CXCR2 inhibitors may drive senescence as well as suppress tumor progression in advanced prostate cancer [41]. CXCR2-dominated interplays between cancer cells and macrophages drive gastric cancer metastases [42].

CXCR2 was mainly involved in modulating chemokine signaling pathway, cytokine-cytokine receptor interaction, inflammatory response, and complement as well as DNA damage repair. CXCR2 produced by cancer cells induce neutrophil extracellular traps, which interferes with immune cytotoxicity [43]. CXCR2-modified CAR-T cells enhance trafficking capacity, which improves therapeutic response in hepatocellular carcinoma [44]. Blockage of CXCR2 may enhance the sensitivity and effectiveness of immunotherapy and suppress tumor progression [18]. Combining previous evidence, CXCR2 may exert a critical role in modulating immune response. Nevertheless, there are several limitations in our study. The regulatory functions of CXCR2 in ovarian carcinogenesis and tumor immunity will be investigated in in vitro and in vivo experiments. Moreover, prognostic significance of CXCR2 expression should be verified in a larger ovarian cancer cohort.

5. Conclusion

Collectively, our integrative analysis of CXCR2 uncovered the prominent associations of CXCR2 expression with survival outcomes, immune cell infiltration, and immune response in ovarian cancer, which could contribute to explain the function of CXCR2 in carcinogenesis and immunotherapeutic response from various perspectives.

Abbreviations

TMB:Tumor mutation burden
CXCR:Chemokine receptor
TCGA:The Cancer Genome Atlas
GDC:Genomic Data Commons
GTEx:Genotype-Tissue Expression
GEPIA2:Gene Expression Profiling Interactive Analysis 2
OS:Overall survival
DSS:Disease-specific survival
MSI:Microsatellite instability
cBioPortal:cBio Cancer Genomics Portal
FDR:False discovery rate
GO:Gene Ontology
KEGG:Kyoto Encyclopedia of Genes and Genomes
TIMER:Tumor Immune Estimation Resource
GSEA:Gene set enrichment analysis
MsigDB:Molecular Signature Database
NES:Nominal enrichment score.

Data Availability

The data used to support the findings of this study are included within the supplementary information files.

Conflicts of Interest

The authors declare no conflicts of interest.

Authors’ Contributions

Haizhou Ji and Mi Ren contributed equally to this work.

Acknowledgments

This work was supported by the Innovation Project of the Department of Health of Fujian Province (2017-CX-9).

Supplementary Materials

Supplementary Figure 1: prognostic implication of CXCR2 in diverse cancer types. (A) Kaplan-Meier curves of the OS differences between high and low expression of CXCR2 groups for ACC, DLBC, LAML, LGG, OV, and MESO. (B) Kaplan-Meier curves of the DSS differences between high and low expression of CXCR2 groups for ACC, LGG, OV, and STAD. (Supplementary Materials)