Evidence-Based Complementary and Alternative Medicine

Review Article

Researches on Transcriptome Sequencing in the Study of Traditional Chinese Medicine

Table 2

The transcriptome of medicinal plants.
Traditional Chinese medicine nameSequencing timeSequencing countrySequencing platforms
Artemisia annua [26]2009ChinaGS FLX™ System
Epimedium sagittatum [27]2010ChinaGS FLX System
Glycyrrhiza uralensis [12]2010ChinaGS FLX System
Panax quinquefolius [11]2010ChinaGS FLX Titanium System
Salvia miltiorrhiza [6]2010ChinaGS FLX Titanium System
Cervus nippon [28]2011ChinaIllumina HiSeq™ 2000
C. nippon [29]2011ChinaIllumina HiSeq 2000
Panax ginseng [30]2011ChinaGS FLX Titanium System
Siraitia grosvenorii [31]2011ChinaIllumina GA II platform
Lonicera japonica [32]2012ChinaIllumina GA II platform
Carthamus tinctorius L [17]2012ChinaIllumina HiSeq 2000
Picrorhiza kurroa [33]2012IndiaIllumina HiSeq 2000
Lilium regale [34]2012NetherlandsGS FLX Titanium System
Polygonum cuspidatum [35]2012ChinaIllumina HiSeq 2000
Eucommia ulmoides [36]2012ChinaIllumina HiSeq 2000
Cemw elaphus [37]2012ChinaIllumina HiSeq 2000
Nelumbo nucifera Gaertn. [38]2013USAIllumina HiSeq 2000
L. japonica [39]2013ChinaGS FLX System
Aquilaria sinensis [40]2013ChinaIllumina HiSeq 2000
Amomum villosum Lour. [41]2014ChinaIllumina HiSeq 2000
Fallopia multiflora [42]2014ChinaIllumina HiSeq 2000
Conyza blinii H.Lév. [43]2015ChinaIllumina HiSeq 2500
Glycyrrhiza uralensis Fisch. [44]2015ChinaIllumina HiSeq 2500
Gynostemma pentaphyllum (Thunb.) Makin [45]2015ChinaIllumina HiSeq 2000
Erigeron breviscapus. [46]2015ChinaIllumina HiSeq 2000
Polygala tenuifolia [47]2015ChinaIllumina HiSeq 2000
Xanthium strumarium L. [48]2015ChinaIllumina HiSeq platform
Lonicera macranthoides Hand.-Mazz. [49]2015ChinaIllumina HiSeq 2000
Lepidium apetalum Willd. [16]2016ChinaIllumina HiSeq 2000
Andrographis paniculata [50]2016IndiaIllumina HiSeq 2000
Platycodon grandiflorus [21]2016JapanIllumina HiSeq platform
Achyranthes bidentata Bl. [51]2016ChinaIllumina HiSeq 2500
Forsythia koreana [52]2016JapanIllumina HiSeq 1500
Picrorhiza kurroa [23]2016IndiaIllumina HiSeq platform
Ephedra sinica [53]2016JapanIllumina Genome Analyzer IIx
Pinellia ternata [54]2016ChinaIllumina HiSeq 2000
Swertia japonica [55]2016JapanIllumina HiSeq platform
Anemone flaccida [56]2016ChinaIllumina HiSeq 2000
Atractylodes lancea [57]2016ChinaIllumina HiSeq platform
Plantago ovata [58]2016IndiaIllumina Genome Analyzer II
Eleutherococcus senticosus Maxim. [59]2016ChinaIllumina HiSeq platform
Corydalis (C.) [60]2016ChinaIllumina HiSeq 2000
Dendrobium nobile Lindl. [19]2017ChinaIllumina HiSeq 4000
Dendrobium officinale [20]2017ChinaIllumina HiSeq 2500
Dracocephalum tanguticum [61]2017ChinaIllumina HiSeq 4000
Swertia mussotii [22]2017ChinaIllumina HiSeq 2000
Elettaria cardamomum (L.) Maton. [62]2017IndiaIon Proton sequencer
Physalis alkekengi [63]2017JapanIllumina HiSeq 2000
Physalis peruviana [63]2017JapanIllumina HiSeq 2000
Taxillusi chinensis (DC.) Danser [64]2017ChinaIllumina HiSeq 2000
Cassia angustifolia Vahl. [65]2017IndiaIllumina MiSeq platform