Research Article

Systems Pharmacology Dissection of Traditional Chinese Medicine Wen-Dan Decoction for Treatment of Cardiovascular Diseases

Table 3

Pathway and target interaction.

PathwayTarget

Pathways in cancerE2F1, E2F2, PPARD, PTGS2, MMP9, PPARG, PTEN, MMP2, TGFB1, MMP1, AKT1, FOS, CASP3, CASP9, CASP8, NOS2, MYC, CHUK, PRKCA, EGFR, PIK3CG, AR, RXRB, RELA, RXRA, RUNX1T1, TP53, RB1, CDK2, MAPK1, CCND1, HIF1A, JUN, MAPK3, VEGFA, MDM2, MAPK8, ERBB2, EGLN1, BCL2L1, BCL2, NKX3-1, EGF, IL6, MET, RAF1, BIRC5, MAPK10, STAT1, STAT3, CDKN1A, GSK3B, RASSF1, BAX, IKBKB
Non-small cell lung cancerPRKCA, E2F1, EGFR, PIK3CG, E2F2, RXRB, RXRA, ERBB2, TP53, RAF1, RB1, AKT1, MAPK1, CCND1, CASP9, RASSF1, MAPK3, EGF
Colorectal cancerEGFR, PIK3CG, MET, TP53, RAF1, BIRC5, MAPK10, TGFB1, AKT1, MAPK1, FOS, CASP3, CCND1, CASP9, GSK3B, JUN, BAX, BCL2, MAPK3, MAPK8, MYC
Small cell lung cancerE2F1, PIK3CG, E2F2, PTGS2, RXRB, RXRA, RELA, TP53, RB1, BCL2L1, PTEN, CDK2, AKT1, CCND1, CASP9, BCL2, NOS2, IKBKB, MYC, CHUK
Toll-like receptor signaling pathwayPIK3CG, IL6, TNF, RELA, MAPK10, CXCL11, STAT1, CXCL10, AKT1, MAPK1, FOS, MAPK14, JUN, MAPK3, CASP8, IL1B, MAPK8, IKBKB, CHUK, SPP1
VEGF signaling pathwayPRKCA, PIK3CG, PTGS2, RAF1, KDR, AKT1, MAPK1, PLA2G4A, CASP9, MAPK14, VEGFA, MAPK3, HSPB1, NOS3, PPP3CA, PLA2G2E, NFATC1
T cell receptor signaling pathwayIL4, PIK3CG, TNF, RELA, RAF1, IL10, AKT1, MAPK1, FOS, CD40LG, MAPK14, GSK3B, JUN, IFNG, MAPK3, PPP3CA, IKBKB, CHUK, NFATC1, IL2
ApoptosisPIK3CG, TNF, RELA, TP53, BCL2L1, AKT1, CASP3, CASP9, BAX, CASP7, BCL2, CASP8, IL1B, PRKACA, PPP3CA, IKBKB, CHUK, IL1A
ErbB signaling pathwayPRKCA, EGFR, PIK3CG, ERBB3, ERBB2, RAF1, ELK1, MAPK10, AKT1, MAPK1, CDKN1A, GSK3B, JUN, MAPK3, MAPK8, EGF, MYC
Insulin signaling pathwaySREBF1, PIK3CG, HK2, ACACA, RAF1, ELK1, PDE3A, IGF2, MAPK10, AKT1, MAPK1, SLC2A4, PYGM, GSK3B, MAPK3, FASN, MAPK8, PRKACA, PTPN1, IKBKB, INSR
p53 signaling pathwayTP53, CHEK1, CHEK2, PTEN, CDK2, CCNB1, CDKN1A, CASP3, CCND1, CASP9, BAX, CASP8, SERPINE1, MDM2, IGFBP3
NOD-like receptor signaling pathwayIL6, CCL2, TNF, RELA, CXCL2, MAPK10, MAPK1, MAPK14, MAPK3, CASP8, IL1B, MAPK8, IKBKB, CHUK
Progesterone-mediated oocyte maturationPIK3CG, ADCY2, RAF1, PDE3A, IGF2, MAPK10, CDK2, AKT1, CCNB1, PGR, MAPK1, MAPK14, MAPK3, PRKACA, MAPK8, CCNA2
MAPK signaling pathwayTNF, ELK1, TGFB1, AKT1, FOS, CASP3, IL1B, PRKACA, PPP3CA, EGF, MYC, CHUK, IL1A, RASA1, EGFR, PRKCA, RELA, TP53, RAF1, MAPK10, MAPK1, PLA2G4A, MAPK14, JUN, MAPK3, HSPB1, MAPK8, PLA2G2E, IKBKB
Focal adhesionPRKCA, EGFR, PIK3CG, CAV1, ERBB2, MET, COL3A1, ELK1, RAF1, MAPK10, PTEN, KDR, AKT1, MAPK1, CCND1, GSK3B, JUN, BCL2, VEGFA, MAPK3, MAPK8, COL1A1, EGF, SPP1
Calcium signaling pathwayPRKCA, EGFR, PIK3CG, CAV1, ERBB2, MET, COL3A1, ELK1, RAF1, MAPK10, PTEN, KDR, AKT1, MAPK1, CCND1, GSK3B, JUN, BCL2, VEGFA, MAPK3, MAPK8, COL1A1, EGF, SPP1PRKCA, EGFR, DRD1, ADCY2, PTGER3, ERBB3, ERBB2, CHRM5, ADRB2, ADRB1, CHRM3, CHRM2, CHRM1, ADRA1B, ADRA1A, NOS3, CHRNA7, PRKACA, PPP3CA, NOS2, HTR2C, ADRA1D, HTR2A
GnRH signaling pathwayPRKCA, EGFR, ADCY2, RAF1, ELK1, MAPK10, MMP2, PRKCD, MAPK1, PLA2G4A, MAPK14, JUN, MAPK3, PRKACA, MAPK8, PLA2G2E
Fc epsilon RI signaling pathwayPRKCA, IL4, PIK3CG, TNF, RAF1, MAPK10, PRKCD, AKT1, MAPK1, PLA2G4A, MAPK14, MAPK3, MAPK8, PLA2G2E
Adipocytokine signaling pathwayPPARA, TNF, RXRB, RXRA, RELA, MAPK10, ADIPOQ, STAT3, AKT1, SLC2A4, MAPK8, IKBKB, CHUK
B cell receptor signaling pathwayPIK3CG, AKT1, MAPK1, FOS, RELA, JUN, GSK3B, MAPK3, RAF1, PPP3CA, IKBKB, CHUK, NFATC1
Steroid hormone biosynthesisAKR1C3, CYP3A4, HSD3B2, CYP1B1, HSD3B1, CYP1A1, SULT1E1, UGT1A1, AKR1C1, CYP19A1
Neurotrophin signaling pathwayPIK3CG, RELA, TP53, RAF1, MAPK10, PRKCD, AKT1, MAPK1, MAPK14, GSK3B, JUN, BAX, BCL2, MAPK3, MAPK8, IKBKB
Cell cycleE2F1, E2F2, TP53, CHEK1, RB1, CHEK2, TGFB1, CDK2, CCNB1, CCND1, CDKN1A, GSK3B, PCNA, MDM2, MYC, CCNA2
Chemokine signaling pathwayPIK3CG, ADCY2, CCL2, NCF1, RELA, CXCL2, RAF1, STAT1, CCL16, CXCL11, PRKCD, STAT3, CXCL10, AKT1, MAPK1, GSK3B, MAPK3, PRKACA, IKBKB, CHUK
Neuroactive ligand-receptor interactionOPRM1, DRD1, GABRA2, GABRA1, PTGER3, GABRA3, GABRA5, PRSS1, CHRM5, ADRB2, ADRB1, CHRM4, CHRM3, GRIA2, CHRM2, CHRM1, F2, ADRA1B, ADRA2A, ADRA1A, ADRA2C, HTR2C, ADRA1D, HTR2A, OPRD1
Gap junctionPRKCA, EGFR, DRD1, ADCY2, GJA1, RAF1, MAPK1, ADRB1, MAPK3, PRKACA, EGF, HTR2C, HTR2A
Metabolism of xenobiotics by cytochrome P450GSTM1, AKR1C3, CYP3A4, GSTM2, CYP1B1, CYP1A1, ADH1C, CYP1A2, UGT1A1, AKR1C1
Epithelial cell signaling in Helicobacter pylori infectionEGFR, CASP3, RELA, MAPK14, JUN, MET, MAPK8, MAPK10, IKBKB, CHUK
Vascular smooth muscle contractionPRKCA, KCNMA1, MAPK1, PLA2G4A, ADCY2, MAPK3, ADRA1B, ADRA1A, RAF1, PRKACA, PLA2G2E, PRKCD, ADRA1D
Arachidonic acid metabolismAKR1C3, PLA2G4A, PTGS2, PTGES, PTGS1, LTA4H, ALOX5, PLA2G2E, ALOX12
PPAR signaling pathwayPPARA, PPARD, OLR1, RXRB, RXRA, PPARG, ADIPOQ, MMP1, FABP5
RIG-I-like receptor signaling pathwayTNF, RELA, MAPK14, CASP8, MAPK8, MAPK10, IKBKB, CHUK, CXCL10
Cytokine-cytokine receptor interactionEGFR, IL4, IL6, TNF, CCL2, MET, CXCL2, CCL16, CXCL11, IL10, TGFB1, CXCL10, KDR, CD40LG, VEGFA, IFNG, IL1B, EGF, IL1A, IL2
Drug metabolismGSTM1, CYP3A4, GSTM2, MAOA, MAOB, ADH1C, CYP1A2, UGT1A1
Wnt signaling pathwayPRKCA, CCND1, PPARD, GSK3B, JUN, TP53, MAPK8, PRKACA, PPP3CA, MAPK10, MYC, FOSL1, NFATC1
mTOR signaling pathwayPIK3CG, AKT1, MAPK1, HIF1A, MAPK3, VEGFA, IGF2
Complement and coagulation cascadesPLAT, F10, THBD, F3, F2, SERPINE1, F7, PLAU
Jak-STAT signaling pathwayPIK3CG, IL4, AKT1, IL6, CCND1, IFNG, PIM1, BCL2L1, STAT1, MYC, IL10, STAT3, IL2
Tryptophan metabolismCYP1B1, CYP1A1, MAOA, MAOB, CYP1A2, CAT
Aldosterone-regulated sodium reabsorptionPRKCA, PIK3CG, MAPK1, MAPK3, IGF2, INSR
Oocyte meiosisCCNB1, PGR, MAPK1, AR, ADCY2, MAPK3, IGF2, PRKACA, PPP3CA, CDK2
Fc gamma R-mediated phagocytosisPRKCA, PIK3CG, AKT1, MAPK1, PLA2G4A, NCF1, MAPK3, RAF1, PRKCD
Natural killer cell mediated cytotoxicityPRKCA, PIK3CG, ICAM1, MAPK1, CASP3, TNF, MAPK3, IFNG, RAF1, PPP3CA, NFATC1
Intestinal immune network for IgA productionIL4, IL6, CD40LG, IL10, TGFB1, IL2
Long-term depressionPRKCA, MAPK1, PLA2G4A, GRIA2, MAPK3, RAF1, PLA2G2E
Androgen and estrogen metabolismHSD3B2, HSD3B1, SULT1E1, UGT1A1, CYP19A1
Arginine and proline metabolismODC1, GOT1, MAOA, MAOB, NOS3, NOS2
Cytosolic DNA-sensing pathwayIL6, RELA, IL1B, IKBKB, CHUK, CXCL10
Adherens junctionEGFR, MAPK1, ERBB2, MET, MAPK3, PTPN1, INSR
Leukocyte transendothelial migrationPRKCA, PIK3CG, VCAM1, ICAM1, CLDN4, NCF1, MAPK14, MMP9, MMP2
Tyrosine metabolismTYR, GOT1, MAOA, MAOB, ADH1C
Linoleic acid metabolismCYP3A4, PLA2G4A, CYP1A2, PLA2G2E