Research Article

Deciphering the Metabolomics-Based Intervention of Yanghe Decoction on Hashimoto’s Thyroiditis

Table 4

Enrichment analysis results based on mass spectrometry combined with gas phase.

PathwayTotalHitsRaw p−ln(p)Holm adjustFDRImpactHits cpdTotal cpd

Pyrimidine metabolism4150.00136.62930.110.1080.09731Deoxyuridine cpd: C00526; uracil cpd: C00106; beta-alanine cpd: C00099; thymine cpd: C00178; 3-aminoisobutanoic acid cpd: C05145Thioredoxin cpd: C00342; uridine 5′-diphosphate cpd: C00015; L-Glutamine cpd: C00064; carbamoylphosphate cpd: C00169; 4,5-dihydroorotic acid cpd: C00337; orotidylic acid cpd: C01103; RNA cpd: C00046; uridine triphosphate cpd: C00075; uridine 5′-monophosphate cpd: C00105; uridine cpd: C00299; dihydrouracil cpd: C00429; ureidopropionic acid cpd: C02642; cytidine triphosphate cpd: C00063; CDP cpd: C00112; cytidine monophosphate cpd: C00055; cytidine cpd: C00475; thioredoxin disulfide cpd: C00343; dCDP cpd: C00705; dCTP cpd: C00458; dCMP cpd: C00239; deoxycytidine cpd: C00881; deoxyuridine triphosphate cpd: C00460; dUDP cpd: C01346; dUMP cpd: C00365; deoxyuridine cpd: C00526; thymidine 5′-triphosphate cpd: C00459; dTDP cpd: C00363; 5-thymidylic acid cpd: C00364; thymidine cpd: C00214; dihydrothymine cpd: C00906; ureidoisobutyric acid cpd: C05100; P1,P4-bis(5′-uridyl) tetraphosphate cpd: C06198; ureidosuccinic acid cpd: C00438; phosphoribosyl pyrophosphate cpd: C00119; orotic acid cpd: C00295; uracil cpd: C00106; beta-alanine cpd: C00099; DNA cpd: C00039; deoxyribose 1-phosphate cpd: C00672; thymine cpd: C00178; 3-aminoisobutanoic acid cpd: C05145
Pantothenate and CoA biosynthesis1520.03843.2608110Beta-alanine cpd: C00099; uracil cpd: C00106Dephospho-CoA cpd: C00882; pantetheine 4′-phosphate cpd: C01134; pantetheine cpd: C00831; 4-phosphopantothenoylcysteine cpd: C04352; D-pantothenoyl-L-cysteine cpd: C04079; d-4′-phosphopantothenate cpd: C03492; L-cysteine cpd: C00097; pantothenic acid cpd: C00864; ureidopropionic acid cpd: C02642; dihydrouracil cpd: C00429; L-valine cpd: C00183; coenzyme a cpd: C00010; beta-alanine cpd: C00099; uracil cpd: C00106; alpha-ketoisovaleric acid cpd: C00141
Beta-alanine metabolism1720.04843.0283110.44444Beta-alanine cpd: C00099; uracil cpd: C00106Acrylyl-CoA cpd: C00894; 3-hydroxypropionyl-CoA cpd: C05668; hydroxypropionic acid cpd: C01013; malonyl-CoA cpd: C00083; beta-alanine cpd: C00099; L-aspartic acid cpd: C00049; spermine cpd: C00750; 1,3-diaminopropane cpd: C00986; 3-aminopropionaldehyde cpd: C05665; ureidopropionic acid cpd: C02642; dihydrouracil cpd: C00429; anserine cpd: C01262; propionyl-CoA cpd: C00100; Acetyl-CoA cpd: C00024; malonic semialdehyde cpd: C00222; spermidine cpd: C00315; uracil cpd: C00106
Starch and sucrose metabolism1920.05932.8253110.07451D-maltose cpd: C00208; isomaltose cpd: C00252beta-D-fructose cpd: C02336; sucrose cpd: C00089; uridine diphosphate glucuronic acid cpd: C00167; uridine diphosphate glucose cpd: C00029; glucose 1-phosphate cpd: C00103; 3-methoxy-4-hydroxyphenylglycol glucuronide cpd: C03033; glucose 6-phosphate cpd: C00668; alpha-D-glucose cpd: C00267; starch cpd: C00369; amylose cpd: C00718; trehalose cpd: C01083; D-maltose cpd: C00208; D-glucose cpd: C00031; dextrin cpd: C00721; isomaltose cpd: C00252; beta-D-fructose 6-phosphate cpd: C05345; UDP-D-xylose cpd: C00190; alpha-D-glucose 1,6-bisphosphate cpd: C01231; D-glucuronic acid cpd: C00191
Propanoate metabolism2020.0652.733110Beta-alanine cpd: C00099; 2-hydroxybutyric acid cpd: C05984(S)-methylmalonic acid semialdehyde cpd: C06002; methylmalonyl-CoA cpd: C00683; propionyl-CoA cpd: C00100; propinol adenylate cpd: C05983; R-methylmalonyl-CoA cpd: C01213; succinic acid cpd: C00042; hydroxypropionic acid cpd: C01013; beta-alanine cpd: C00099; 2-propyn-1-al cpd: C05985; acetyl-CoA cpd: C00024; malonyl-CoA cpd: C00083; 2-hydroxybutyric acid cpd: C05984; acrylyl-CoA cpd: C00894; propionic acid cpd: C00163; succinyl-CoA cpd: C00091; 3-hydroxypropionyl-CoA cpd: C05668; malonic semialdehyde cpd: C00222; propynoic acid cpd: C00804; acetoacetyl-CoA cpd: C00332; 2-ketobutyric acid cpd: C00109
D-glutamine and D-glutamate metabolism510.10162.2866110Oxoglutaric acid cpd: C00026L-glutamic acid cpd: C00025; D-glutamine cpd: C00819; L-glutamine cpd: C00064; oxoglutaric acid cpd: C00026; D-glutamic acid cpd: C00217
Sulfur metabolism510.10162.2866110.3Sulfate cpd: C00059Phosphoadenosine phosphosulfate cpd: C00053; adenosine phosphosulfate cpd: C00224; sulfite cpd: C00094; sulfate cpd: C00059; adenosine 3′,5′-diphosphate cpd: C00054
Cyanoamino acid metabolism610.12072.1145110Glycine cpd: C000373-Cyano-L-alanine cpd: C02512; beta-aminopropionitrile cpd: C05670; glycine cpd: C00037; gamma-glutamyl-beta-cyanoalanine cpd: C05711; gamma-glutamyl-beta-aminopropiononitrile cpd: C06114; L-serine cpd: C00065
Methane metabolism910.17561.7394110Glycine cpd: C00037S-formylglutathione cpd: C01031; glycine cpd: C00037; 5,10-methylene-THF cpd: C00143; S-(Hydroxymethyl)glutathione cpd: C14180; methanol cpd: C00132; formic acid cpd: C00058; L-serine cpd: C00065; formaldehyde cpd: C00067; 5-methyltetrahydrofolic acid cpd: C00440
Nitrogen metabolism910.17561.7394110Glycine cpd: C00037Ammonia cpd: C00014; carbon dioxide cpd: C00011; L-glutamic acid cpd: C00025; L-glutamine cpd: C00064; L-cystathionine cpd: C02291; L-histidine cpd: C00135; carbamoylphosphate cpd: C00169; carbonic acid cpd: C01353; glycine cpd: C00037
Arginine and proline metabolism4420.23821.4345110.04414Hydroxyproline cpd: C01157; 4-acetamidobutanoic acid cpd: C02946L-glutamine cpd: C00064; ammonia cpd: C00014; carbamoylphosphate cpd: C00169; ornithine cpd: C00077; citrulline cpd: C00327; L-aspartic acid cpd: C00049; argininosuccinic acid cpd: C03406; L-arginine cpd: C00062; L-glutamic acid cpd: C00025; N-acetylornithine cpd: C00437; L-proline cpd: C00148; peptide cpd: C00012; D-proline cpd: C00763; hydroxyproline cpd: C01157; pyrroline hydroxycarboxylic acid cpd: C04281; L-4-hydroxyglutamate semialdehyde cpd: C05938; L-erythro-4-hydroxyglutamate cpd: C05947; N-(o)-hydroxyarginine cpd: C05933; guanidinoacetic acid cpd: C00581; creatine cpd: C00300; gamma-aminobutyric acid cpd: C00334; agmatine cpd: C00179; L-glutamic-gamma-semialdehyde cpd: C01165; L-glutamic acid 5-phosphate cpd: C03287; (S)-1-pyrroline-5-carboxylate cpd: C03912; putrescine cpd: C00134; 4-aminobutyraldehyde cpd: C00555; S-adenosylmethioninamine cpd: C01137; S-adenosylmethionine cpd: C00019; spermidine cpd: C00315; N-Acetylputrescine cpd: C02714; N4-Acetylaminobutanal cpd: C05936; cis-4-hydroxy-D-proline cpd: C03440; Fumaric acid cpd: C00122; urea cpd: C00086; N-Acetyl-L-alanine cpd: C00624; 1-pyrroline-2-carboxylic acid cpd: C03564; D-4-hydroxy-2-oxoglutarate cpd: C05946; nitric oxide cpd: C00533; phosphocreatine cpd: C02305; 4-guanidinobutanoic acid cpd: C01035; spermine cpd: C00750; 4-acetamidobutanoic acid cpd: C02946; 1-pyrroline-4-hydroxy-2-carboxylate cpd: C04282
Glycerolipid metabolism1810.32131.1355110.28098Glycerol cpd: C00116Triacylglycerol cpd: C00422; acyl-CoA cpd: C00040; 1,2-diacyl-sn-glycerol cpd: C00641; PA(16 :  : 0/16 :  : 0) cpd: C00416; 1-acyl-sn-glycerol 3-phosphate cpd: C00681; 1-acylglycerol cpd: C01885; glycerol 3-phosphate cpd: C00093; dihydroxyacetone cpd: C00184; glycerol cpd: C00116; lactaldehyde cpd: C05999; D-glyceraldehyde cpd: C00577; glyceric acid cpd: C00258; digalactosyl-diacylglycerol cpd: C06037; fatty acid cpd: C00162; dihydroxyacetone phosphate cpd: C00111; propylene glycol cpd: C00583; 3-phospho-D-glycerate cpd: C00197; 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol cpd: C03692
Citrate cycle (TCA cycle)2010.35011.0496110.06799Oxoglutaric acid cpd: C00026Enzyme N6-(dihydrolipoyl)lysine cpd: C15973; oxoglutaric acid cpd: C00026; thiamine pyrophosphate cpd: C00068; Enzyme N6-(lipoyl)lysine cpd: C15972; 3-carboxy-1-hydroxypropylthiamine diphosphate cpd: C05381; Succinyl-CoA cpd: C00091; succinic acid cpd: C00042; oxalosuccinic acid cpd: C05379; isocitric acid cpd: C00311; oxalacetic acid cpd: C00036; Acetyl-CoA cpd: C00024; L-malic acid cpd: C00149; cis-aconitic acid cpd: C00417; citric acid cpd: C00158; pyruvic acid cpd: C00022; 2-(a-hydroxyethyl)thiamine diphosphate cpd: C05125; [dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine cpd: C16254; Fumaric acid cpd: C00122; S-acetyldihydrolipoamide-E cpd: C16255; phosphoenolpyruvic acid cpd: C00074
Butanoate metabolism2210.37770.97365110Oxoglutaric acid cpd: C000263-Butyn-1-al cpd: C06145; (R)-3-hydroxybutyric acid cpd: C01089; acetoacetic acid cpd: C00164; 3-hydroxy-3-methylglutaryl-CoA cpd: C00356; Acetyl-CoA cpd: C00024; Acetoacetyl-CoA cpd: C00332; (S)-3-hydroxybutanoyl-CoA cpd: C01144; Crotonoyl-CoA cpd: C00877; gamma-aminobutyric acid cpd: C00334; L-glutamic acid cpd: C00025; Butanoyl-CoA cpd: C00136; butanal cpd: C01412; succinic acid semialdehyde cpd: C00232; butyric acid cpd: C00246; oxoglutaric acid cpd: C00026; thiamine pyrophosphate cpd: C00068; pyruvic acid cpd: C00022; 3-butynoate cpd: C06144; 1-butanol cpd: C06142; succinic acid cpd: C00042; 2-hydroxyglutarate cpd: C02630; 2-(a-hydroxyethyl)thiamine diphosphate cpd: C05125
Alanine, aspartate, and glutamate metabolism2410.40420.90587110.06329Oxoglutaric acid cpd: C00026N-Acetyl-L-aspartic acid cpd: C01042; 2-oxosuccinamate cpd: C02362; L-aspartic acid cpd: C00049; D-aspartic acid cpd: C00402; argininosuccinic acid cpd: C03406; adenylsuccinic acid cpd: C03794; L-Alanine cpd: C00041; succinic acid semialdehyde cpd: C00232; L-glutamic acid cpd: C00025; gamma-aminobutyric acid cpd: C00334; L-Glutamine cpd: C00064; ammonia cpd: C00014; 2-keto-glutaramic acid cpd: C00940; (S)-1-pyrroline-5-carboxylate cpd: C03912; oxalacetic acid cpd: C00036; L-Asparagine cpd: C00152; Fumaric acid cpd: C00122; pyruvic acid cpd: C00022; ureidosuccinic acid cpd: C00438; succinic acid cpd: C00042; oxoglutaric acid cpd: C00026; carbamoylphosphate cpd: C00169; glucosamine 6-phosphate cpd: C00352; 5-phosphoribosylamine cpd: C03090
Galactose metabolism2610.42960.84494110Glycerol cpd: C00116Stachyose cpd: C01613; D-tagatose 6-phosphate cpd: C01097; D-gal alpha 1->6d-gal alpha 1->6d-glucose cpd: C05404; sucrose cpd: C00089; raffinose cpd: C00492; melibiose cpd: C05402; D-galactose cpd: C00124; galactosylglycerol cpd: C05401; epimelibiose cpd: C05400; melibiitol cpd: C05399; galactinol cpd: C01235; Alpha-D-Glucose cpd: C00267; alpha-lactose cpd: C00243; glucose 1-phosphate cpd: C00103; uridine diphosphategalactose cpd: C00052; uridine diphosphate glucose cpd: C00029; galactose 1-phosphate cpd: C00446; glucose 6-phosphate cpd: C00668; D-tagatose 1,6-bisphosphate cpd: C03785; D-Fructose cpd: C00095; D-glucose cpd: C00031; galactitol cpd: C01697; glycerol cpd: C00116; D-Mannose cpd: C00159; sorbitol cpd: C00794; myoinositol cpd: C00137
Glutathione metabolism2610.42960.84494110.00573Glycine cpd: C00037R-S-cysteinylglycine cpd: C05729; R-S-glutathione cpd: C02320; glutathione cpd: C00051; NADP cpd: C00006; NADPH cpd: C00005; oxidized glutathione cpd: C00127; gamma-glutamylcysteine cpd: C00669; glycine cpd: C00037; L-cysteine cpd: C00097; L-glutamic acid cpd: C00025; cysteinylglycine cpd: C01419; pyroglutamic acid cpd: C01879; L-amino acid cpd: C00151; 5-L-glutamyl-L-alanine cpd: C03740; RX cpd: C01322; ornithine cpd: C00077; putrescine cpd: C00134; spermidine cpd: C00315; cadaverine cpd: C01672; tryparedoxin cpd: C16663; trypanothione cpd: C02090; S-substituted L-cysteine cpd: C05726; spermine cpd: C00750; aminopropylcadaverine cpd: C16565; tryparedoxin disulfide cpd: C16664; trypanothione disulfide cpd: C03170
Fatty acid elongation in mitochondria2710.44190.8167110Palmitic acid cpd: C00249Palmityl-CoA cpd: C00154; (2e)-hexadecenoyl-CoA cpd: C05272; (S)-3-hydroxyhexadecanoyl-CoA cpd: C05258; 3-oxohexadecanoyl-CoA cpd: C05259; Acetyl-CoA cpd: C00024; Tetradecanoyl-CoA cpd: C02593; (2e)-tetradecenoyl-CoA cpd: C05273; (S)-3-hydroxytetradecanoyl-CoA cpd: C05260; 3-oxotetradecanoyl-CoA cpd: C05261; Lauroyl-CoA cpd: C01832; (2e)-dodecenoyl-CoA cpd: C03221; (S)-3-hydroxydodecanoyl-CoA cpd: C05262; 3-oxododecanoyl-CoA cpd: C05263; Decanoyl-CoA (n-C10: 0CoA) cpd: C05274; (2e)-decenoyl-CoA cpd: C05275; (S)-hydroxydecanoyl-CoA cpd: C05264; 3-oxodecanoyl-CoA cpd: C05265; Octanoyl-CoA cpd: C01944; (2e)-octenoyl-CoA cpd: C05276; (S)-hydroxyoctanoyl-CoA cpd: C05266; 3-oxooctanoyl-CoA cpd: C05267; Hexanoyl-CoA cpd: C05270; trans-2-hexenoyl-CoA cpd: C05271; (S)-hydroxyhexanoyl-CoA cpd: C05268; 3-oxohexanoyl-CoA cpd: C05269; Butanoyl-CoA cpd: C00136; palmitic acid cpd: C00249
Porphyrin and chlorophyll metabolism2710.44190.8167110Glycine cpd: C00037Cobinamide cpd: C05774; heme O cpd: C15672; heme cpd: C00032; glycine cpd: C00037; bilirubin diglucuronide cpd: C05787; Cob(I)yrinate a,c diamide cpd: C06505; Fe2 + cpd: C14818; hemoglobin cpd: C01708; biliverdin cpd: C00500; protoporphyrinogen IX cpd: C01079; coproporphyrin III cpd: C03263; uroporphyrinogen III cpd: C01051; hydroxymethylbilane cpd: C01024; porphobilinogen cpd: C00931; 5-aminolevulinic acid cpd: C00430; uroporphyrinogen I cpd: C05766; L-Glutamic acid cpd: C00025; bilirubin cpd: C00486; protoporphyrin IX cpd: C02191; adenosyl cobinamide cpd: C06508; heme a cpd: C15670; D-Urobilinogen cpd: C05791; adenosyl cobyrinic acid a,c diamide cpd: C06506; Fe3+ cpd: C14819; coproporphyrinogen I cpd: C05768; l-glutamyl-tRNA(Glu) cpd: C02987; cytochrome c cpd: C00524
Glycine, serine, and threonine metabolism3110.48860.71625110.26884Glycine cpd: C00037L-Serine cpd: C00065; choline cpd: C00114; glyceric acid cpd: C00258; betaine cpd: C00719; guanidinoacetic acid cpd: C00581; 3-phospho-D-glycerate cpd: C00197; dimethylglycine cpd: C01026; L-cystathionine cpd: C02291; glycine cpd: C00037; phosphoserine cpd: C01005; sarcosine cpd: C00213; 5,10-methylene-THF cpd: C00143; L-threonine cpd: C00188; lipoylprotein cpd: C02051; aminoacetone cpd: C01888; tetrahydrofolic acid cpd: C00101; S-aminomethyldihydrolipoylprotein cpd: C01242; dihydrolipoylprotein cpd: C02972; D-serine cpd: C00740; betaine aldehyde cpd: C00576; hydroxypyruvic acid cpd: C00168; creatine cpd: C00300; phosphohydroxypyruvic acid cpd: C03232; L-cysteine cpd: C00097; glyoxylic acid cpd: C00048; L-2-amino-3-oxobutanoic acid cpd: C03508; pyruvic acid cpd: C00022; carbon dioxide cpd: C00011; 5-aminolevulinic acid cpd: C00430; pyruvaldehyde cpd: C00546; ammonia cpd: C00014
Valine, leucine, and isoleucine degradation3810.56140.57739110Methylmalonic acid cpd: C02170Enzyme N6-(lipoyl)lysine cpd: C15972; 2-methyl-1-hydroxybutyl-ThPP cpd: C15978; enzyme N6-(dihydrolipoyl)lysine cpd: C15973; 2-methyl-1-hydroxypropyl-ThPP cpd: C15976; 3-methyl-1-hydroxybutyl-ThPP cpd: C15974; acetyl-CoA cpd: C00024; acetoacetyl-CoA cpd: C00332; acetoacetic acid cpd: C00164; 3-hydroxy-3-methylglutaryl-CoA cpd: C00356; 3-methylcrotonyl-CoA cpd: C03069; 3-hydroxyisovaleryl-CoA cpd: C05998; isovaleryl-CoA cpd: C02939; 3-methyl-2-oxovaleric acid cpd: C00671; thiamine pyrophosphate cpd: C00068; L-valine cpd: C00183; 2-methylacetoacetyl-CoA cpd: C03344; (S)-3-hydroxyisobutyrate cpd: C06001; tiglyl-CoA cpd: C03345; butyryl-CoA cpd: C00630; S-(2-methylbutanoyl)-dihydrolipoamide cpd: C15979; alpha-ketoisovaleric acid cpd: C00141; L-isoleucine cpd: C00407; R-methylmalonyl-CoA cpd: C01213; methylmalonyl-CoA cpd: C00683; propionyl-CoA cpd: C00100; (S)-methylmalonic acid semialdehyde cpd: C06002; (S)-b-aminoisobutyric acid cpd: C03284; 2-methyl-3-hydroxybutyryl-CoA cpd: C04405; (S)-3-hydroxyisobutyryl-CoA cpd: C06000; methacrylyl-CoA cpd: C03460; (S)-2-methylbutanoyl-CoA cpd: C15980; S-(2-methylpropionyl)-dihydrolipoamide-E cpd: C15977; 4-methyl-2-oxopentanoate cpd: C00233; S-(3-methylbutanoyl)-dihydrolipoamide-E cpd: C15975; L-leucine cpd: C00123; 3-methylglutaconyl-CoA cpd: C03231; succinyl-CoA cpd: C00091; methylmalonic acid cpd: C02170
Fatty acid metabolism3910.57090.56053110Palmitic acid cpd: C00249Palmityl-CoA cpd: C00154; hexanoyl-CoA cpd: C05270; butanoyl-CoA cpd: C00136; acetyl-CoA cpd: C00024; (S)-3-hydroxybutanoyl-CoA cpd: C01144; cis,cis-3,6-dodecadienoyl-CoA cpd: C05280; (S)-hydroxyhexanoyl-CoA cpd: C05268; (S)-hydroxyoctanoyl-CoA cpd: C05266; octanoyl-CoA cpd: C01944; (S)-hydroxydecanoyl-CoA cpd: C05264; decanoyl-CoA (n-C10: 0CoA) cpd: C05274; (S)-3-hydroxydodecanoyl-CoA cpd: C05262; lauroyl-CoA cpd: C01832; primary alcohol cpd: C00226; glutaryl-CoA cpd: C00527; (S)-3-hydroxytetradecanoyl-CoA cpd: C05260; tetradecanoyl-CoA cpd: C02593; fatty acid cpd: C00162; (S)-3-hydroxyhexadecanoyl-CoA cpd: C05258; palmitic acid cpd: C00249; (2E)-hexadecenoyl-CoA cpd: C05272; trans-2-hexenoyl-CoA cpd: C05271; crotonoyl-CoA cpd: C00877; acetoacetyl-CoA cpd: C00332; trans,cis-Lauro-2,6-dienoyl-CoA cpd: C05279; coenzyme A cpd: C00010; 3-oxohexanoyl-CoA cpd: C05269; 3-oxooctanoyl-CoA cpd: C05267; (2E)-octenoyl-CoA cpd: C05276; 3-oxodecanoyl-CoA cpd: C05265; (2E)-decenoyl-CoA cpd: C05275; 3-oxododecanoyl-CoA cpd: C05263; (2E)-dodecenoyl-CoA cpd: C03221; aldehyde cpd: C00071; 3-oxotetradecanoyl-CoA cpd: C05261; (2E)-tetradecenoyl-CoA cpd: C05273; omega-hydroxy fatty acid cpd: C03547; 3-oxohexadecanoyl-CoA cpd: C05259; L-palmitoylcarnitine cpd: C02990
Tryptophan metabolism4010.58030.5443110N-acetylserotonin cpd: C00978L-tryptophan cpd: C00078; melatonin cpd: C01598; serotonin cpd: C00780; 5-hydroxykynurenamine cpd: C05638; 5-hydroxykynurenine cpd: C05651; 5-hydroxy-L-tryptophan cpd: C00643; L-formylkynurenine cpd: C02700; acetoacetyl-CoA cpd: C00332; (S)-3-hydroxybutanoyl-CoA cpd: C01144; crotonoyl-CoA cpd: C00877; glutaryl-CoA cpd: C00527; oxoadipic acid cpd: C00322; 2-amino-3-carboxymuconic acid semialdehyde cpd: C04409; 3-hydroxyanthranilic acid cpd: C00632; L-kynurenine cpd: C00328; formylanthranilic acid cpd: C05653; L-3-hydroxykynurenine cpd: C03227; 3-hydroxykynurenamine cpd: C05636; indoleacetaldehyde cpd: C00637; 5-hydroxy-N-formylkynurenine cpd: C05648; 5-hydroxyindoleacetaldehyde cpd: C05634; tryptamine cpd: C00398; indoleacrylic acid cpd: C00331; acetyl-N-formyl-5-methoxykynurenamine cpd: C05642; 6-hydroxymelatonin cpd: C05643; N-acetylserotonin cpd: C00978; formyl-5-hydroxykynurenamine cpd: C05647; 4,6-dihydroxyquinoline cpd: C05639; acetyl-CoA cpd: C00024; 2-aminomuconic acid semialdehyde cpd: C03824; 2-aminobenzoic acid cpd: C00108; L-tryptophanyl-tRNA(Trp) cpd: C03512; cinnavalininate cpd: C05640; 4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoic acid cpd: C05645; 4-(2-aminophenyl)-2,4-dioxobutanoic acid cpd: C01252; 4,8-dihydroxyquinoline cpd: C05637; indoleacetic acid cpd: C00954; 5-hydroxyindoleacetic acid cpd: C05635; N-methylserotonin cpd: C06212; N-methyltryptamine cpd: C06213
Biosynthesis of unsaturated fatty acids4210.59830.51359110Palmitic acid cpd: C00249(13Z,16Z)-docosadi-13,16-enoyl-CoA cpd: C16645; tetracosenoyl-CoA cpd: C16532; docosenoyl-CoA cpd: C16531; icosenoyl-CoA cpd: C16530; tetracosanoyl-CoA cpd: C16529; docosanoyl-CoA cpd: C16528; (7Z,10Z,13Z,16Z)-docosatetraenoyl-CoA cpd: C16170; (11Z,14Z)-icosadienoyl-CoA cpd: C16180; (7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA cpd: C16166; (11Z,14Z,17Z)-icosatrienoyl-CoA cpd: C16179; palmityl-CoA cpd: C00154; stearoyl-CoA cpd: C00412; eicosanoyl-CoA cpd: C02041; oleoyl-CoA cpd: C00510; linoleoyl-CoA cpd: C02050; arachidonyl-CoA cpd: C02249; 8,11,14-eicosatrienoyl-CoA cpd: C03595; gamma-linolenoyl-CoA cpd: C03035; (4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA cpd: C16169; (5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA cpd: C16165; alpha-linolenoyl-CoA cpd: C16162; 13,16-docosadienoic acid cpd: C16533; nervonic acid cpd: C08323; erucic acid cpd: C08316; icosenoic acid cpd: C16526; tetracosanoic acid cpd: C08320; behenic acid cpd: C08281; 7,10,13,16-docosatetraenoic acid cpd: C16527; icosadienoic acid cpd: C16525; clupanodonic acid cpd: C16513; icosatrienoic acid cpd: C16522; palmitic acid cpd: C00249; stearic acid cpd: C01530; arachidic acid cpd: C06425; oleic acid cpd: C00712; linoleic acid cpd: C01595; arachidonic acid cpd: C00219; 8,11,14-eicosatrienoic acid cpd: C03242; gamma-linolenic acid cpd: C06426; (4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoic acid cpd: C06429; eicosapentaenoic acid cpd: C06428; alpha-linolenic acid cpd: C06427
Fatty acid biosynthesis4310.60710.49905110Palmitic acid cpd: C00249Tetradecanoyl-[acp] cpd: C05761; malonyl-[acyl-carrier protein] cpd: C01209; hexadecanoyl-[acp] cpd: C05764; octadecanoyl-[acyl-carrier protein] cpd: C04088; oleoyl-[acyl-carrier protein] cpd: C01203; dodecanoyl-[acyl-carrier protein] cpd: C05223; decanoyl-[acp] cpd: C05755; octanoyl-[acp] cpd: C05752; Hexanoyl-[acp] cpd: C05749; butyryl-[acp] cpd: C05745; trans-hexadec-2-enoyl-[acp] cpd: C05763; (3R)-3-hydroxypalmitoyl-[acyl-carrier protein] cpd: C04633; 3-oxohexadecanoyl-[acp] cpd: C05762; trans-tetradec-2-enoyl-[acp] cpd: C05760; (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] cpd: C04688; 3-oxotetradecanoyl-[acp] cpd: C05759; trans-dodec-2-enoyl-[acp] cpd: C05758; (R)-3-hydroxydodecanoyl-[acp] cpd: C05757; 3-oxododecanoyl-[acp] cpd: C05756; trans-Dec-2-enoyl-[acp] cpd: C05754; (3R)-3-hydroxydecanoyl-[acyl-carrier protein] cpd: C04619; 3-oxodecanoyl-[acp] cpd: C05753; trans-Oct-2-enoyl-[acp] cpd: C05751; (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] cpd: C04620; 3-oxooctanoyl-[acp] cpd: C05750; trans-Hex-2-enoyl-[acp] cpd: C05748; (R)-3-hydroxyhexanoyl-[acp] cpd: C05747; 3-oxohexanoyl-[acp] cpd: C05746; but-2-enoyl-[acyl-carrier protein] cpd: C04246; (3R)-3-hydroxybutanoyl-[acyl-carrier protein] cpd: C04618; acetyl-[acyl-carrier protein] cpd: C03939; Malonyl-CoA cpd: C00083; acetyl-CoA cpd: C00024; acyl-carrier protein cpd: C00229; Holo-[carboxylase] cpd: C06250; carboxybiotin-carboxyl-carrier protein cpd: C04419; myristic acid cpd: C06424; 3-oxostearoyl-[acp] cpd: C16219; stearic acid cpd: C01530; oleic acid cpd: C00712; dodecanoic acid cpd: C02679; palmitic acid cpd: C00249; acetoacetyl-[acp] cpd: C05744
Primary bile acid biosynthesis4610.63230.45839110.02976Glycine cpd: C00037Cholesterol cpd: C00187; cholest-5-ene-3beta,26-diol cpd: C15610; 25-hydroxycholesterol cpd: C15519; 7 alpha,26-dihydroxy-4-cholesten-3-one cpd: C17336; 4-cholesten-7alpha,12alpha-diol-3-one cpd: C17339; 7a-hydroxy-cholestene-3-one cpd: C05455; 5-b-cholestane-3a , 7a ,12a-triol cpd: C05454; (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA cpd: C15613; (25S)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA cpd: C17343; 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA cpd: C05460; 3a,7a,12a-trihydroxy-5b-24-oxocholestanoyl-CoA cpd: C05467; 3a,7a-dihydroxy-5b-24-oxocholestanoyl-CoA cpd: C05449; chenodeoxycholoyl-CoA cpd: C05337; glycine cpd: C00037; taurine cpd: C00245; 3alpha,7alpha,12alpha,26-tetrahydroxy-5beta-cholestane cpd: C05446; 3a,7a,12a-trihydroxy-5b-cholestan-26-al cpd: C01301; 3 beta,7 alpha-dihydroxy-5-cholestenoate cpd: C17335; 7-a,27-dihydroxycholesterol cpd: C06341; 7a-Hydroxycholesterol cpd: C03594; 7-a,25-dihydroxycholesterol cpd: C15520; Choloyl-CoA cpd: C01794; 24-hydroxycholesterol cpd: C13550; 3alpha,7alpha-dihydroxy-5beta-cholestanate cpd: C04554; 3a,7a-dihydroxy-5b-cholestane cpd: C05452; 3 alpha,7 alpha,26-trihydroxy-5beta-cholestane cpd: C05444; 3a,7a-dihydroxy-5b-cholestan-26-al cpd: C05445; (25R)-3alpha,7alpha-dihydroxy-5beta-cholestanoyl-CoA cpd: C17345; (25S)-3alpha,7alpha-dihydroxy-5beta-cholestanoyl-CoA cpd: C17346; 3a,7a-dihydroxy-5b-cholest-24-enoyl-CoA cpd: C05447; 3a,7a,12a-Trihydroxy-5b-cholestanoic acid cpd: C04722; 3a,7a,12a-trihydroxy-5b-cholestanoyl-CoA cpd: C05448; 3a,7a,12a,24-tetrahydroxy-5b-cholestanoyl-CoA cpd: C05450; 3 beta-hydroxy-5-cholestenoate cpd: C17333; (24S)-cholest-5-ene-3beta,7alpha,24-triol cpd: C15518; 7 alpha-hydroxy-3-oxo-4-cholestenoate cpd: C17337; 7a,12a-dihydroxy-5b-cholestan-3-one cpd: C05453; 7a-hydroxy-5b-cholestan-3-one cpd: C05451; chenodeoxycholic acid cpd: C02528; chenodeoxycholic acid glycine conjugate cpd: C05466; taurochenodesoxycholic acid cpd: C05465; 7alpha,25-dihydroxy-4-cholesten-3-one cpd: C17332; cholic acid cpd: C00695; glycocholic acid cpd: C01921; taurocholic acid cpd: C05122; 7 alpha,24-dihydroxy-4-cholesten-3-one cpd: C17331

Purine metabolism6810.77490.25507110Sulfate cpd: C00059Guanosine diphosphate cpd: C00035; xanthine cpd: C00385; D-ribulose 5-phosphate cpd: C00117; phosphoribosyl pyrophosphate cpd: C00119; L-glutamine cpd: C00064; 5-phosphoribosylamine cpd: C03090; glycineamideribotide cpd: C03838; phosphoribosylformylglycineamidine cpd: C04640; AICAR cpd: C04677; SAICAR cpd: C04823; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate cpd: C04751; RNA cpd: C00046; cyclic AMP cpd: C00575; adenosine triphosphate cpd: C00002; dATP cpd: C00131; ADP cpd: C00008; dADP cpd: C00206; adenosine monophosphate cpd: C00020; adenylsuccinic acid cpd: C03794; inosinic acid cpd: C00130; adenosine cpd: C00212; deoxyadenosine monophosphate cpd: C00360; deoxyadenosine cpd: C00559; deoxyinosine cpd: C05512; xanthosine cpd: C01762; IDP cpd: C00104; guanosine monophosphate cpd: C00144; xanthylic acid cpd: C00655; hypoxanthine cpd: C00262; inosine cpd: C00294; guanine cpd: C00242; deoxyguanosine cpd: C00330; allantoic acid cpd: C00499; uric acid cpd: C00366; 5-hydroxyisourate cpd: C11821; guanosine 3′-diphosphate 5′-triphosphate cpd: C04494; guanosine triphosphate cpd: C00044; 2′-deoxyguanosine 5′-monophosphate cpd: C00362; dGDP cpd: C00361; guanosine cpd: C00387; dGTP cpd: C00286; cyclic GMP cpd: C00942; sulfate cpd: C00059; adenosine phosphosulfate cpd: C00224; phosphoadenosine phosphosulfate cpd: C00053; 5′-Phosphoribosyl-N-formylglycinamide cpd: C04376; inosine triphosphate cpd: C00081; xanthosine 5-triphosphate cpd: C00700; diadenosine tetraphosphate cpd: C01260; P1,P4-bis(5′-xanthosyl) tetraphosphate cpd: C04392; adenosine diphosphate ribose cpd: C00301; adenine cpd: C00147; dIDP cpd: C01344; 2′-deoxyinosine triphosphate cpd: C01345; diadenosine triphosphate cpd: C06197; phosphoribosyl formamidocarboxamide cpd: C04734; 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate cpd: C12248; 5-aminoimidazole ribonucleotide cpd: C03373; DNA cpd: C00039; ammonia cpd: C00014; urea cpd: C00086; (S)-ureidoglycolic acid cpd: C00603; guanosine 3′,5′-bis(diphosphate) cpd: C01228; adenosine 3′,5′-diphosphate cpd: C00054; diguanosine tetraphosphate cpd: C01261; dIMP cpd: C06196; 5-amino-4-imidazolecarboxyamide cpd: C04051; (S) (+)-allantoin cpd: C02350
Aminoacyl-tRNA biosynthesis6910.77990.24863110Glycine cpd: C00037L-asparagine cpd: C00152; tRNA(Asn) cpd: C01637; L-histidine cpd: C00135; tRNA(His) cpd: C01643; L-phenylalanine cpd: C00079; tRNA(Phe) cpd: C01648; L-arginine cpd: C00062; tRNA(Arg) cpd: C01636; L-glutamine cpd: C00064; tRNA(Gln) cpd: C01640; L-cysteine cpd: C00097; tRNA(Cys) cpd: C01639; glycine cpd: C00037; tRNA(Gly) cpd: C01642; tRNA(Asp) cpd: C01638; L-aspartic acid cpd: C00049; L-serine cpd: C00065; tRNA(Ser) cpd: C01650; L-methionine cpd: C00073; tRNA(Met) cpd: C01647; L-valine cpd: C00183; tRNA(Val) cpd: C01653; L-alanine cpd: C00041; tRNA(Ala) cpd: C01635; L-lysine cpd: C00047; tRNA(Lys) cpd: C01646; L-isoleucine cpd: C00407; tRNA(Ile) cpd: C01644; tRNA(Leu) cpd: C01645; L-leucine cpd: C00123; L-threonine cpd: C00188; tRNA(Thr) cpd: C01651; tRNA(Trp) cpd: C01652; L-tryptophan cpd: C00078; N10-formyl-THF cpd: C00234; L-methionyl-tRNA cpd: C02430; L-tyrosine cpd: C00082; tRNA(Tyr) cpd: C00787; L-proline cpd: C00148; tRNA(Pro) cpd: C01649; L-glutamic acid cpd: C00025; tRNA(Glu) cpd: C01641; glutaminyl-tRNA cpd: C02282; L-asparaginyl-tRNA(Asn) cpd: C03402; tRNA(Sec) cpd: C16636; L-seryl-tRNA(Sec) cpd: C06481; O-phosphoseryl-tRNA(Sec) cpd: C16638; L-histidyl-tRNA(His) cpd: C02988; L-phenylalanyl-tRNA(Phe) cpd: C03511; L-arginyl-tRNA(Arg) cpd: C02163; L-cysteinyl-tRNA(Cys) cpd: C03125; Glycyl-tRNA(Gly) cpd: C02412; L-aspartyl-tRNA(Asp) cpd: C02984; L-seryl-tRNA(Ser) cpd: C02553; L-valyl-tRNA(Val) cpd: C02554; L-alanyl-tRNA cpd: C00886; L-lysyl-tRNA cpd: C01931; L-isoleucyl-tRNA(Ile) cpd: C03127; L-leucyl-tRNA cpd: C02047; L-threonyl-tRNA(Thr)
cpd: C02992; L-tryptophanyl-tRNA(Trp) cpd: C03512; tetrahydrofolic acid cpd: C00101; N-formylmethionyl-tRNA cpd: C03294; L-tyrosyl-tRNA(Tyr) cpd: C02839; L-prolyl-tRNA(Pro) cpd: C02702; L-glutamyl-tRNA(Glu) cpd: C02987; L-glutamyl-tRNA(Gln) cpd: C06112; L-aspartyl-tRNA(Asn) cpd: C06113; L-selenocysteinyl-tRNA(Sec) cpd: C06482
PathwayMetabolic pathway name
TotalThe number of metabolites in this pathway
HitsThe number of differential metabolites hit this pathway
Raw pP value of metabolic pathway enrichment analysis
−ln (p)Minus log base E of P
Holm adjustP values corrected by Holm–Bonferroni method for multiple hypothesis testing
FDRP value corrected by false discovery rate (FDR) method for multiple hypothesis testing
ImpactImpact value of metabolic pathway topology analysis
Hits cpdThe names and KEGG IDs of differential metabolites hit the pathway
Total cpdAll metabolite names and KEGG IDs contained in this pathway