Research Article
In Silico and In Vitro Studies of Antibacterial Activity of Cow Urine Distillate (CUD)
Table 4
Binding energy and hydrogen bond interaction amino acids.
| | SN | Name | Structure | H-bond interactive amino acids | Binding energy (Kcal/mol) | RMSD value |
| | 1 | Gallic acid | | Asp45 | −6.4 | 1.22 | | Glu42 | | Ser108 |
| | 2 | Ferulic acid | | Val71 | −6.8 | 1.60 | | Asp73 |
| | 3 | 2-Hydroxycinnamic acid | | Val71 | −6.9 | 1.05 | | Asp73 |
| | 4 | Cinnamic acid | | Val71 | −6.7 | 1.15 | | Asp73 |
| | 5 | Salicylic acid | | Asp73 | −6.1 | 1.37 | | Asn46 |
| | 6 | Allantoin | | Asp73 | −6.0 | 1.43 | | Thr165 |
| | 7 | Phenol | | Val118 | −5.2 | 1.87 |
| | 8 | Ciprofloxacin (reference) | | Lys189 | −7.4 | 1.51 |
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