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| No. | Name | Water type | Code | Notes |
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| 1 | Niejiayan | Karst surface water | NJY | Shanmuhe Basin outlet |
| 2 | Huangzhouhe–Shanmuhe intersection | HZHH | Downstream of Huangzhouhe–Shanmuhe intersection |
| 3 | Shanmuhe–Huangzhouhe mouth | HZHX | Shanmuhe–Huangzhouhe mouth |
| 4 | Huangzhouhe–Shanmuhe mouth | HZHD | Huangzhouhe Basin outlet |
| 5 | Jiangjiatian River | JJTH | Has relatively high amount of Spirogyra |
| 6 | Jiangjiatian River west | JJTX | West tributary of Jiangjiatian River |
| 7 | Jiangjiatian River east | JJTD | Jiangjiatian River mouth of Shanmuhe |
| 8 | Liangcha River intersection | LCHH | Downstream of Liangcha River intersection |
| 9 | Liangcha River west | LCHX | West tributary of Liangcha River |
| 10 | Liangcha River east | LCHD | Shanmuhe–Liangcha River mouth |
| 11 | Huoma River | HMH | Tributary of Huangzhouhe |
| 12 | Baiduo intersection | BDH | Downstream of intersection of north and south tributaries of Baiduo River |
| 13 | Baiduo north | BDB | North tributary of Baiduo River |
| 14 | Baiduo south | BDN | South tributary of Baiduo River |
| 15 | Shandong River single-plank bridge downstream | XBDMQX | Downstream of Xiaba single-plank bridge of Shandong River |
| 16 | Shandong River single-plank bridge upstream | XBDMQ | Upstream of Xiaba single-plank bridge of Shandong River |
| 17 | Shandong River Xiaojiaba 5 | XJB5 | Shandong River Xiaojiaba 5 |
| 18 | Shandong River Xiaojiaba 4 | XJB4 | Shandong River Xiaojiaba 4 |
| 19 | Shandong River Xiaojiaba 3 | XJB3 | Shandong River Xiaojiaba 3 |
| 20 | Shandong River Xiaojiaba 2 | XJB2 | Shandong River Xiaojiaba 2 |
| 21 | Shengxi | SX | Shengxi, upstream of Shandong River |
| 22 | Tangtou River | Allogenic surface water | TTH | North allogenic water in the basin |
| 23 | Chayuan River fall | DZ | North allogenic water in the basin, also influenced by rocks in Qingxudong Formation |
| 24 | Xindi River (near Shiqiao Village) | XDH | Allogenic water near Shiqiao Village |
| 25 | Xiaojia River trench | XJHG | Surface allogenic water |
| 26 | Niejiayan spring | Karst groundwater | NJTQ | Spring flow is very small, only 0.02 L/s |
| 27 | Daguniang well | DGNJ | Karst spring on the left bank of Shanmuhe |
| 28 | Gaotan | GT | Karst spring on the right bank of Shanmuhe |
| 29 | Youyu Dong | YYD | Karst spring on the right bank of Shanmuhe with big and stable flow across seasons |
| 30 | Luojiatian spring | LJT2 | Groundwater in weathering crust of dolomite |
| 31 | Heichong upper spring | HC3 | Heichong upper surface spring |
| 32 | Xiaba spring | XBQ | Karst spring in Xiaba |
| 33 | Xiaba big spring | XBDQ | Karst spring in Xiaba whose flow is bigger than Xiaba spring |
| 34 | Single-plank bridge | DMQQ | Karst spring in single-plank bridge |
| 35 | Laozhaichang well | LZCJ | Groundwater near Laozhaichang |
| 36 | Hetaoping spring | Allogenic groundwater | HTP | Hard quartz sandstone near the spring |
| 37 | Lengshui River spring | Mixed groundwater | | Big flow, near Xindi Village |
| 38 | Xindi spring (Xindi three-eyed well) | XDQ | Karst spring in Xindi |
| 39 | Shuangbikong | SBK | Outlet of an underground river in Shanmuhe Basin, influenced by Qingxudong Formation limestone, dolomite, and allogenic water |
| / | Yuntaishan, Niejiayan | Rain water | NJYR | Two samples of atmospheric precipitation are collected |
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