Research Article
De Novo Assembly of the Pea (Pisum sativum L.) Nodule Transcriptome
| | Bioproject | Biosample | SRA | Platform | Submitted by | Description | TSA | | Pea genotype | Sample | Time of harvesting |
| | PRJNA257308 | SAMN02950507 | SRX669192 | Illumina
HiSeq 2000 | University of Minnesota, Nevin Young; 2014-08-01 | Little Marvel | Nodules | 30 days after inoculation | NA | | SRX669212 | Illumina
HiSeq 2000 | Little Marvel | Nodules | 30 days after inoculation | NA |
| | PRJNA267198 | SAMN03153588 | SRS747845 | NA | |
Cameor | Nodules | Development stage, 5-6 open leaves/7-8 nodes (nodules stage A) | NA | | SAMN03153589 | SRS752085 | NA | INRA, Jonathan Kreplak; 2014-10-30 |
Cameor | Nodules | Development stage, flowering (nodules stage B) | NA | | SAMN03153591 | SRS752086 | NA | |
Cameor | Nodules | Development stage, 18 days after sowing, that is, 10 days after inoculation (nodules stage G) | NA |
| | PRJNA277074 | SAMN03396628 | SRX952469 | Illumina
HiSeq 2000 | | Kaspa | Nodules | 3-month-old plants | GCMF00000000.1;
GCMG00000000.1;
GCMH00000000.1;
GCMI00000000.1;
GCMJ00000000.1;
GCMK00000000.1;
GCML00000000.1 | | SRX952470 | Illumina
MiSeq | | Kaspa | Nodules | 3-month-old plants | | SAMN03396630 | SRX952472 | Illumina
HiSeq 2000 | Department of Economic Development, Jobs, Transport and Resources, 5 Ring Road, Bundoora, VIC 3083, Australia; Shimna Sudheesh; 2015-03-09 | Kaspa | Root tips | 4-week-old plants | | SRX952473 | Illumina
MiSeq | Kaspa | Root tips | 4-week-old plants | | PRJNA277076 | SAMN03396658 | SRX952517 | Illumina
HiSeq 2000 | Parafield | Nodules | 3-month-old plant | GCKA00000000.1;
GCMM00000000.1;
GCMN00000000.1;
GCMO00000000.1;
GCMP00000000.1;
GCMQ00000000.1 | | SRX952518 | Illumina
MiSeq | | Parafield | Nodules | 3-month-old plant | | SAMN03396660 | SRX952521 | Illumina
HiSeq 2000 | | Parafield | Root tips | 4-week-old plants | | SRX952522 | Illumina
MiSeq | | Parafield | Root tips | 4-week-old plants |
| | PRJNA284856 | SAMN03733514 | SRS945123 | Illumina
GAIIx | All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia | SGE | Nodules | 12 days | Registered
as SUB965211 | | SAMN03733554 | SRS945125 | Illumina
GAIIx | SGE | Root tips | 12 days | Registered
as SUB965299 |
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