Comparative Genomics Analysis of Plasmid pPV989-94 from a Clinical Isolate of Pantoea vagans PV989

Figure 1

The circular map of plasmid pPV989-94. (1) The circle on the outside shows positions in bp. (2) The four regions (replication, R1; transfer conjugation, R2; transfer leading, R3; and the variable region, R4) in the circle are in blue, green, purple, and pink, respectively. Arrows display ORFs on the lagging strand (outwards) or leading strand (inwards), with ORFs involved in replication in blue, conjugation in light yellow, pilus formation in light green, transfer leading in light purple, MGEs in pink, and others in blue-green. (3) The G + C content with values more than 50% are directed outward; otherwise, inward; (4) GC skew (G − C/G + C) with the positive values directed outward are in green, and the negative values directed inward are in purple.