In Silico Study of Mercury Resistance Genes Extracted from Pseudomonas spp. Involved in Bioremediation: Understanding the Promoter Regions and Regulatory Elements
Table 2
TSS number, its promoter predictive score values, and distance from 5UTR region of the corresponding gene.
SN
Gene ID
Gene symbol
No. of predictive promoter
No. of TSS identified
The predictive score value cut off at 0.80
5UTR region size (bp)
Orientation of complementary strands
1.
69751970
merA
2
2
0.97, 0.91
-929
-ve
2.
66762507
merB
2
2
0.85, 0.82
-1951
-ve
3.
66762509
merC
1
1
0.85
-686
-ve
4.
69747981
merD
2
2
0.93, 0.89
2921
+ve
5.
69751968
merE
2
2
0.86, 0.94
-1361
-ve
6.
69751971
merF
2
2
0.97, 0.91
-687
-ve
7.
69751974
merR
4
4
0.97, 0.89, 0.89, 0.86
865
+ve
8.
69751972
merP
2
2
0.97, 0.91
-409
-ve
9.
69747978
merT
3
3
0.92, 0.93, 0.89
663
+ve
10.
46432416
merG
3
3
0.89, 0.94, 0.85
2217
+ve
NNPP tool prediction results are considered reliable at 0.8 cutoff values for the prokaryotic organism [9].
