Complete Genome Sequence and Comparative Genome Analysis of <i>Variovorax</i> sp. Strains PAMC28711, PAMC26660, and PAMC28562 and Trehalose Metabolic Pathways in Antarctica Isolates

<table class="table-group" id="tab4"><tr><td><table class="table"><tr><td class="thead-hr" colspan="5"><hr/></td></tr><tr class="thead"><td class="align_left">Pathways</td><td class="align_center">Genes</td><td class="align_center">Gene products</td><td class="align_center">EC number</td><td class="align_center">CAZyme families/subfamilies</td></tr><tr><td class="thead-hr" colspan="5"><hr/></td></tr><tr><td class="align_left" rowspan="5">Biosynthesis</td><td class="align_center">TPS</td><td class="align_center">Trehalose 6-phosphate synthase</td><td class="align_center">2.4.1.15</td><td class="align_center">GT20</td></tr><tr><td class="align_center">TPP</td><td class="align_center">Trehalose 6-phosphate phosphatase</td><td class="align_center">3.1.3.12</td><td class="align_center">GT21</td></tr><tr><td class="align_center">TS</td><td class="align_center">Trehalose synthase</td><td class="align_center">5.499.16</td><td class="align_center">GH13</td></tr><tr><td class="align_center">TreY</td><td class="align_center">Maltooligosyl-trehalose synthase</td><td class="align_center">5.499.15</td><td class="align_center">CBM48 and GH13</td></tr><tr><td class="align_center">TreZ</td><td class="align_center">Maltooligosyl-trehalose trehaldohydrolase</td><td class="align_center">3.2.1.141</td><td class="align_center">CBM48 and GH14</td></tr><tr><td class="align_left" colspan="5"><hr/></td></tr><tr><td class="align_left">Degradation</td><td class="align_center">TreH</td><td class="align_center">Trehalase</td><td class="align_center">3.2.1.28</td><td class="align_center">GH37 and GH15</td></tr><tr class="table-tr"><td colspan="5"><hr class="tbody-hr"/></td></tr></table></td></tr></table>

<div>CAZyme families/subfamilies associated with trehalose metabolic pathway and their respective EC numbers.</div>

International Journal of Microbiology

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Table 4

Table 4: Complete Genome Sequence and Comparative Genome Analysis of <i>Variovorax</i> sp. Strains PAMC28711, PAMC26660, and PAMC28562 and Trehalose Metabolic Pathways in Antarctica Isolates 

Table 4 | Complete Genome Sequence and Comparative Genome Analysis of Variovorax sp. Strains PAMC28711, PAMC26660, and PAMC28562 and Trehalose Metabolic Pathways in Antarctica Isolates 