|
| Gene | Locus tag | Primer sequence (5′-3′) | Amplicon size (bp) | Description |
|
| penA | NGO1542 | penAF_ACCGAAAGACATCGTCGCCT | 172 | Penicillin-binding protein |
| penAR_CGTCGGCACAAGCAAACTGT |
| ponA | NGO0099 | ponAF_GGAGTGGGTCTGGTTGCCAT | 201 | Penicillin-binding protein 1A |
| ponAR_GGCAATAACCGCATTCCGCA |
| pilQ | NGO0094 | pilQF_ACGAGGCTTTGGATTGCGAG | 234 | Type IV pilus secretin PilQ. |
| pilQR_TTATGCTTTTTGCCGCGACCG |
| rpsJ | NGO1841 | rpsJF_CCATCAGGCGCAAATGGGTG | 179 | 30S ribosomal protein S10 |
| rpsJR_CGCCCTGATTGACCGTTCTG |
| 16S rRNA | NGO_r03 | 16SrRNAF_AGCCGTAACACAGGTGCTGC | 209 | 16S ribosomal RNA |
| NGO_r06 |
| NGO_r09 | 16S rRNAR_GACCATTGTATGACGTGTGAAGCC |
| NGO_r12 |
| gyrA | NGO0629 | gyrAF_TTGTGAGAAGCTGGATGACGG | 185 | DNA gyrase subunit A |
| gyrAR_TGGACGAAGGCGAAACCTTG |
| parC | NGO1259 | parCF_GGTTGCCGTCTATGCCTCCT | 213 | DNA topoisomerase IV subunit A |
| parCR_CGCCTGCCTTCGCTTTCAAT |
| parE | NGO1333 | parEF_GCCTTCGCGTTCCATCCAAG | 166 | DNA topoisomerase IV subunit B |
| parER_GATGAACCCCGACCAGCTCA |
| 23S rRNA | NGO_r02 | 23SF_TGCTTCCAAGCCTTCCAC | 171 | 23S ribosomal RNA |
| NGO_r05 | 23SR_GAATGGCGTAACGATGGC |
| NGO_r08 |
| NGO_r11 |
| mtrR | NGO1366 | mtrRF_CGTTGGACGGGCTGATTTGG | 118 | HTH-type transcriptional regulator MtrR |
| mtrRR_CGCAGGCAGGGATGGTTTTC |
| mtrA | NGO1250 | mtrAF_GTGCCTTTTGGGCGGACAAT | 173 | Transcriptional activator of mtrCDE |
| mtrAR_TCCGTCGTGGCTCAACACAT |
| mtrC | NGO1365 | mtrCF_TCCACAACCACCTTGTCCCC | 136 | Cation/multidrug efflux protein |
| mtrCR_GCGGTGCGAAAGATACCGTG |
| mtrD | NGO1364 | mtrDF_CGTATTGCTGGACGGTTGCC | 242 | Cation/multidrug efflux protein |
| mtrDR_GCACGCCATTTATCCGGGTG |
| mtrE | NGO1363 | mtrEF_AGACGGCATTTGTTTGCCCG | 165 | Multidrug transporter |
| mtrER_ATTTGCTCGATGCGGAACGC |
| mtrF | NGO1368 | mtrFF_ACAGTCGAATGGCTGGGCAA | 99 | Integral membrane protein. Newly described efflux pump |
| mtrFR_GAAATACGCACCGACGGCAG |
| macA | NGO1440 | macAF_TTCACGGTCAGCGACGGAAT | 115 | Macrolide transport protein MacA |
| macAR_CCCGTTCGTTTGTGCCGAAT |
| macB | NGO1439 | macBF_ATCTGCCTGATGCTGTCGCT | 199 | Macrolide ABC transporter ATP-binding protein/permease |
| macBR_CCGACGTGCTGATGCTTTGG |
| norM | NGO0395 | norMF_ATCGAAACGGTAGGCGAGCA | 140 | Multidrug efflux protein |
| norMR_AACCGGCAGACTTCACCCAA |
| farA | NGO1683 | farAF_GCGGATTGCCCGAGGATTTC | 183 | Multidrug resistance protein |
| farAR_GCTGAACCGCGAAGATGTGG |
| farB | NGO1682 | farBF_TGTTGCGGAATAGGGCGTGA | 170 | EmrB/QacA subfamily multidrug transporter |
| farBR_CACTGTCGCACATGAAGGGC |
|
