Assessing Candidate Gene nsSNPs for Phenotypic Differences in Double-Strand Break Repair Using Radiation-Induced 𝛾H2A.X Foci

Table 2

Minor allele frequency for selected nsSNPs.

Gene	nsSNP	EGP MAF		HapMap MAF
	(rs#)		CEU	HCB	JPT	YRI
PNKP	rs3739186	0.017	0	0	0	0.034
BRCA1	rs1799950	0.012	0.042	0	0	0
LIG4	rs1805388	0.188	0.167	0.261	0.056	0.158
WRN	rs1346044	0.194	0.233	0.078	0.068	0.15
ATM	rs1800057	0.011	0.025	0	0	0

EGP: Environmental Genome Project
MAF: Minor allele frequency
CEU: Utah residents with ancestry from northern and western Europe
HCB: Han Chinese from Beijing, China
JPT: Japanese from Tokyo, Japan
YRI: Yoruban from Ibadan, Nigeria.