[Retracted] Identification of Signature Genes and Construction of an Artificial Neural Network Model of Prostate Cancer
Table 1
Top 20 clusters with their representative enriched terms (one per cluster).
GO
Category
Description
Count
%
Log 10 (P)
Log 10 (q)
GO: 0006954
GO Biological Processes
inflammatory response
21
8.02
−8.4
−4.06
R-HSA-9031628
Reactome Gene Sets
NGF-stimulated transcription
7
2.67
−7.38
−3.34
R-HSA-8953897
Reactome Gene Sets
Cellular responses to stimuli
23
8.78
−6.49
−2.62
GO: 0009636
GO Biological Processes
response to toxic substance
12
4.58
−6.06
−2.56
GO: 0045638
GO Biological Processes
negative regulation of myeloid cell differentiation
8
3.05
−5.88
−2.49
GO: 0008015
GO Biological Processes
blood circulation
15
5.73
−5.59
−2.27
M5885
Canonical Pathways
NABA MATRISOME ASSOCIATED
21
8.02
−5.53
−2.27
R-HSA-195258
Reactome Gene Sets
RHO GTPase Effectors
13
4.96
−5.19
−2.12
GO: 0050900
GO Biological Processes
leukocyte migration
11
4.2
−5.19
−2.12
GO: 0008202
GO Biological Processes
steroid metabolic process
11
4.2
−4.84
−1.85
GO: 1903034
GO Biological Processes
regulation of response to wounding
9
3.44
−4.81
−1.84
WP383
WikiPathways
Striated muscle contraction pathway
5
1.91
−4.73
−1.8
GO: 0045229
GO Biological Processes
external encapsulating structure organization
11
4.2
−4.59
−1.68
GO: 0009725
GO Biological Processes
response to hormone
19
7.25
−4.53
−1.65
WP465
WikiPathways
Tryptophan metabolism
5
1.91
−4.51
−1.65
GO: 0015840
GO Biological Processes
urea transport
3
1.15
−4.46
−1.65
GO: 0002526
GO Biological Processes
acute inflammatory response
6
2.29
−4.31
−1.58
GO: 0032200
GO Biological Processes
telomere organization
7
2.67
−4.3
−1.57
GO: 2000147
GO Biological Processes
positive regulation of cell motility
16
6.11
−4.24
−1.54
GO: 0030856
GO Biological Processes
regulation of epithelial cell differentiation
8
3.05
−4.14
−1.49
“Count” is the number of genes in the user-provided lists with membership in the given ontology term. “%” is the percentage of all of the user-provided genes that are found in the given ontology term (only input genes with at least one ontology term annotation are included in the calculation). “Log 10 (P)” is the p-value in log base 10. “Log 10 (q)” is the multi-test adjusted p-value in log base 10.
