Research Article
Interfering Expression of Chimeric Transcript SEPT7P2-PSPH Promotes Cell Proliferation in Patients with Nasopharyngeal Carcinoma
Table 1
60 transcripts of fusion genes discovered by NGS including 28 inter- and 32 intrachromosomal fusions from ten FFPE NPC tissues.
| | up_gene | up_chr | down_gene | down_chr | Fusion_Type |
| | IGKC | chr2 | CALR | chr19 | INTERCHR-DS | | IGKJ5 | chr2 | CALR | chr19 | INTERCHR-DS | | MALAT1 | chr11 | RFWD2 | chr1 | INTERCHR-DS | | MRPS18A | chr6 | C5orf25 | chr5 | INTERCHR-DS | | RN7SL1 | chr14 | IGKC | chr2 | INTERCHR-DS | | RN7SL1 | chr14 | IGKJ5 | chr2 | INTERCHR-DS | | RNU6-1 | chr15 | SNORD3A | chr17 | INTERCHR-DS | | RNU6-33 | chr4 | SNORD3A | chr17 | INTERCHR-DS | | RNU6-42 | chr3 | RPS3 | chr11 | INTERCHR-DS | | RNU6-42 | chr3 | SNORD15A | chr11 | INTERCHR-DS | | RNU6-42 | chr3 | SNORD3A | chr17 | INTERCHR-DS | | SAMD12 | chr8 | ATP10D | chr4 | INTERCHR-DS | | ATP1B2 | chr17 | HSD17B12 | chr11 | INTERCHR-SS | | E2F4 | chr16 | RPL14 | chr3 | INTERCHR-SS | | EFCAB4A | chr11 | RN7SK | chr6 | INTERCHR-SS | | IGHG1 | chr14 | NINJ1 | chr9 | INTERCHR-SS | | IGKC | chr2 | CSNK2A2 | chr16 | INTERCHR-SS | | IGKJ5 | chr2 | CSNK2A2 | chr16 | INTERCHR-SS | | MIDN | chr19 | ALMS1 | chr2 | INTERCHR-SS | | PDE4B | chr1 | PPP6R3 | chr11 | INTERCHR-SS | | POU2AF1 | chr11 | PARP11 | chr12 | INTERCHR-SS | | RNU6-2 | chr10 | SNORD3A | chr17 | INTERCHR-SS | | RNU6-36 | chr12 | SNORD3A | chr17 | INTERCHR-SS | | RNU6-42 | chr3 | SNHG12 | chr1 | INTERCHR-SS | | RPL14 | chr3 | GLS | chr2 | INTERCHR-SS | | SLC7A5P2 | chr16 | PHC3 | chr3 | INTERCHR-SS | | SMARCA2 | chr9 | RPL14 | chr3 | INTERCHR-SS | | ZNF827 | chr4 | ZNF318 | chr6 | INTERCHR-SS | | ADCK4 | chr19 | NUMBL | chr19 | INTRACHR-SS-OGO-0GAP | | AP5S1 | chr20 | MAVS | chr20 | INTRACHR-SS-OGO-0GAP | | C12orf74 | chr12 | PLEKHG7 | chr12 | INTRACHR-SS-OGO-0GAP | | COL7A1 | chr3 | UCN2 | chr3 | INTRACHR-SS-OGO-0GAP | | CTBS | chr1 | GNG5 | chr1 | INTRACHR-SS-OGO-0GAP | | CTSD | chr11 | IFITM10 | chr11 | INTRACHR-SS-OGO-0GAP | | EEF1D | chr8 | NAPRT1 | chr8 | INTRACHR-SS-OGO-0GAP | | JAK3 | chr19 | INSL3 | chr19 | INTRACHR-SS-OGO-0GAP | | KIAA0101 | chr15 | CSNK1G1 | chr15 | INTRACHR-SS-OGO-0GAP | | LSM10 | chr1 | STK40 | chr1 | INTRACHR-SS-OGO-0GAP | | MAPK7 | chr17 | RNF112 | chr17 | INTRACHR-SS-OGO-0GAP | | MRPS31P2 | chr13 | TPTE2 | chr13 | INTRACHR-SS-OGO-0GAP | | NPL | chr1 | DHX9 | chr1 | INTRACHR-SS-OGO-0GAP | | PIK3R2 | chr19 | IFI30 | chr19 | INTRACHR-SS-OGO-0GAP | | POLA2 | chr11 | CDC42EP2 | chr11 | INTRACHR-SS-OGO-0GAP | | PPCS | chr1 | CCDC30 | chr1 | INTRACHR-SS-OGO-0GAP | | PROM2 | chr2 | KCNIP3 | chr2 | INTRACHR-SS-OGO-0GAP | | PSTPIP2 | chr18 | EPG5 | chr18 | INTRACHR-SS-OGO-0GAP | | RRM2 | chr2 | C2orf48 | chr2 | INTRACHR-SS-OGO-0GAP | | STYXL1 | chr7 | TMEM120A | chr7 | INTRACHR-SS-OGO-0GAP | | TTTY15 | chrY | USP9Y | chrY | INTRACHR-SS-OGO-0GAP | | VMAC | chr19 | CAPS | chr19 | INTRACHR-SS-OGO-0GAP | | WDFY1 | chr2 | AP1S3 | chr2 | INTRACHR-SS-OGO-0GAP | | WNT10B | chr12 | ARF3 | chr12 | INTRACHR-SS-OGO-0GAP | | EEF1DP3 | chr13 | FRY | chr13 | INTRACHR-SS-OGO-1GAP | | HACL1 | chr3 | COLQ | chr3 | INTRACHR-SS-OGO-1GAP | | IRF6 | chr1 | C1orf74 | chr1 | INTRACHR-SS-OGO-1GAP | | TMSB4Y | chrY | KALP | chrY | INTRACHR-SS-OGO-1GAP | | RMPP | chr9 | SMU1 | chr9 | INTRACHR-SS-OGO-53GAP | | FGFR3 | chr4 | TACC3 | chr4 | INTRACHR-SS-RGO | | SEPT7P2 | chr7 | PSPH | chr7 | INTRACHR-SS-RGO | | SRGAP2B | chr1 | SRGAP2C | chr1 | INTRACHR-SS-RGO |
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chr, chromosome.
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