Journal of Oncology

Research Article

Pancancer Analyses Reveal Genomics and Clinical Characteristics of the SETDB1 in Human Tumors

Table 1

The mRNA and protein information of SETDB1.
mRNA
Accession number		Protein
Accession number		Protein isoformConserved domains
SuperfamilyLocationConserved domain
NM_001145415.2
NM_001393960.1		NP_001138887.1
NP_001380889.1		Histone-lysine N-methyltransferase SETDB1 isoform 1smart00391597 → 672MBD
cd10517674 → 875SET_SETDB1
cl404321202 → 1291SET
pfam18300193 → 250DUF5604
cd20382260 → 341Tudor_SETDB1_rpt1
cd21181348 → 401Tudor_SETDB1_rpt2
NM_012432.4NP_036564.3Histone-lysine N-methyltransferase SETDB1 isoform 2smart00391597 → 672MBD
smart00468679 → 786PreSET
smart00333348 → 400TUDOR
smart003171206 → 1267SET
NM_001243491.2
NM_001393964.1
NM_001393965.1
NM_001393966.1		NP_001230420.1
NP_001380893.1
NP_001380894.1
NP_001380895.1		Histone-lysine N-methyltransferase SETDB1 isoform 3pfam18300193 → 250DUF5604
cd20382260 → 341Tudor_SETDB1_rpt1
cl02573348 → 380Tudor_SF
NM_001366417.1
NM_001366418.1
NM_001393958.1
NM_001393959.1		NP_001353346.1
NP_001353347.1
NP_001380887.1
NP_001380888.1		Histone-lysine N-methyltransferase SETDB1 isoform 4smart00391598 → 673MBD
cd10517675 → 876SET_SETDB1
cl404321203 → 1292SET
pfam18300193 → 250DUF5604
cd20382260 → 341Tudor_SETDB1_rpt1
cd21181348 → 401Tudor_SETDB1_rpt2
NM_001393961.1NP_001380890.1Histone-lysine N-methyltransferase SETDB1 isoform 5smart00391598 → 673MBD
smart00333348 → 400TUDOR
cd10517675 → 876SET_SETDB1
cl404321203 → 1291SET
NM_001393967.1 NM_001393968.1NP_001380896.1
NP_001380897.1		Histone-lysine N-methyltransferase SETDB1 isoform 6pfam18300193 → 225DUF5604
MBD: methyl-CpG binding domain; SET_SETDB1: SET domain (including pre-SET and post-SET domains) found in SET domain bifurcated 1 (SETDB1) and similar proteins; SET: SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily; DUF5604: domain of unknown function (DUF5604); Tudor_SETDB1_rpt1: first Tudor domain found in SET domain bifurcated 1 (SETDB1) and similar proteins; Tudor_SETDB1_rpt2: second Tudor domain found in SET domain bifurcated 1 (SETDB1) and similar proteins; TUDOR: Tudor domain; Tudor_SF: Tudor domain superfamily.