A Novel Approach for Protein-Named Entity Recognition and Protein-Protein Interaction Extraction

Table 7

Performance comparison with other published Bio-NER systems.

System	Precision (%)	Recall (%)	-score (%)
ABNER [15]	88.1	84.8	86.41
Penn BioTagger [16]	87.3	85	86.13
Sun et al. (2007) [12]	69.03	78.05	73.27
Li et al. (2009) [14]	71.14	81.63	76.02
BANNER (2008) [17]	89.3	85.06	87.13
ProNER-machine learning based	92.47	87.13	89.72
ProNER	92.47	89.17	90.79