Research Article

A Novel Approach for Protein-Named Entity Recognition and Protein-Protein Interaction Extraction

Table 8

Comparison with other methods.

SystemDescription-score (%)

Saetre et al. [18]Feature-based64.2
Miwa et al. [19]Multiple kernels60.8
Kim et al. [20]Walk-weighted subsequence kernels56.6
Airola et al. [21]All-path graph kernel56.4
Niu et al. [22]All-path graph kernel53.5
Bui et al. [23]RBF kernel61.2
PPInterFinder [24]Pattern matching66.05
PPIMinerPattern matching, feature-based66.8