Orderly Roulette Selection Based Ant Colony Algorithm for Hierarchical Multilabel Protein Function Prediction

Algorithm 1

The pseudocode of AntMiner algorithm.

Input: training samples

Output: adiscovered list of rules

 (1) examples all training examples;

 (2) Rule_set ;

 (3) while  > maximum uncovered do

 (4) Initialize Pheromones(), Heuristic Information(examples), ;

 (5) ;

 (6) while t < maximum iterations and no stagnation do

 (7)   for   to ants_size do

 (8)    Create Rule(examples);

 (9)   Prune();

 (10)   Evaluate ;

 (11)   ;

 (12)   end for

 (13)  Update Pheromones();

 (14)  Evaluate ;

 (15)  ;

 (16)  ;

 (17) end while

 (18) Traing set Taining set − Covered(, examples);

 (19) Rule_set Rule_set + ;

 (20) end while

 (21) return Rule_set;