Research Article

Nucleoredoxin-Dependent Targets and Processes in Neuronal Cells

Table 2

Potential Nrx targets identified by all three approaches. The table contains the 51 proteins that were identified in all three experiments, i.e., the differential thiol labeling in Nrx-depleted SH-SY5Y cells, and the intermediate trapping using SH-SY5Y and mouse brain extracts. The proteins are sorted alphabetically; full lists can be found in the supplementary material.

Protein IDGene nameProtein name

P49588AARSAlanine-tRNA ligase, cytoplasmic
P23526AHCYAdenosylhomocysteinase
P49419ALDH7A1Alpha-aminoadipic semialdehyde dehydrogenase
P04075ALDOAFructose-bisphosphate aldolase A
P48444ARCN1Coatomer subunit delta
P54687BCAT1Branched-chain amino acid aminotransferase, cytosolic
P78371CCT2T-Complex protein 1 subunit beta
P50990CCT8T-Complex protein 1 subunit theta
P23528CFL1Cofilin-1
Q00610CLTCClathrin heavy chain 1
O94760DDAH1N(G),N(G)-Dimethylarginine dimethylaminohydrolase 1
P26641EEF1GElongation factor 1-gamma
P13639EEF2Elongation factor 2
P09104ENO2Gamma-enolase
P21333FLNAFilamin-A
Q16658FSCN1Fascin
P04406GAPDHGlyceraldehyde-3-phosphate dehydrogenase
P62873GNB1Guanine nucleotide-binding protein
P17174GOT1Aspartate aminotransferase, cytoplasmic
P00505GOT2Aspartate aminotransferase, mitochondrial
Q92769HDAC2Histone deacetylase 2
Q99714HSD17B103-Hydroxyacyl-CoA dehydrogenase type-2
P07900HSP90AA1Heat shock protein HSP 90-alpha
Q9NSE4IARS2Isoleucine-tRNA ligase, mitochondrial
P12268IMPDH2Inosine-5-monophosphate dehydrogenase 2
Q07866KLC1Kinesin light chain 1
P28838LAP3Cytosol aminopeptidase
P55209NAP1L1Nucleosome assembly protein 1-like 1
P12955PEPDXaa-Pro dipeptidase
P14618PKMPyruvate kinase
P62937PPIAPeptidyl-prolyl cis-trans isomerase A
P53041PPP5CSerine/threonine-protein phosphatase 5
Q06830PRDX1Peroxiredoxin-1
Q9H6Z4RANBP3Ran-binding protein 3
P54136RARSArginine-tRNA ligase, cytoplasmic
P39023RPL360S ribosomal protein L3
P36578RPL460S ribosomal protein L4
P61247RPS3A40S ribosomal protein S3a
Q16181SEPT7Septin-7
P37837TALDO1Transaldolase
P60174TPI1Triosephosphate isomerase
Q71U36TUBA1ATubulin alpha-1A chain
Q9BVA1TUBB2BTubulin beta-2B chain
Q16881TXNRD1Thioredoxin reductase 1, cytoplasmic
P62987UBA52Ubiquitin-60S ribosomal protein L40
P61088UBE2NUbiquitin-conjugating enzyme E2 N
P45974USP5Ubiquitin carboxyl-terminal hydrolase 5
Q99536VAT1Synaptic vesicle membrane protein VAT-1 homolog
Q96QK1VPS35Vacuolar protein sorting-associated protein 35
P54577YARSTyrosine-tRNA ligase, cytoplasmic
P63104YWHAZ14-3-3 protein zeta/delta (protein kinase C inhibitor protein 1)