Deep Neural Network for Somatic Mutation Classification

Table 2

The performances of somatic mutation detection by SVM, RF, and forgeNet.

		SN	SP	Acc	MCC	F1
Dataset 1	forgeNet	0.986	0.954	0.972	0.943	0.976
	SVM	0.977	0.956	0.968	0.935	0.972
	RF	0.983	0.964	0.975	0.949	0.978
Dataset 2	forgeNet	0.933	0.989	0.981	0.917	0.928
	SVM	0.933	0.967	0.963	0.847	0.865
	RF	0.870	0.997	0.981	0.915	0.923
Dataset 3	forgeNet	0.971	0.986	0.982	0.957	0.97
	SVM	0.974	0.978	0.977	0.946	0.962
	RF	0.961	0.991	0.982	0.956	0.969