Prediction and Analysis of Protein Ubiquitin Sites in the Model Plant A. thaliana

Table 5

Performances of different features in 1 : 2 ratio.

Method	Sp (%)	Sn (%)	Acc (%)	MCC	F1 score
DNABIND	63.98	65.13	64.55	0.2911	0.6435
DNAbinder	52.96	60.62	56.79	0.1361	0.5507
DBD-Threader	19.41	91.60	55.50	0.1590	0.3037
DNA-Prot	63.71	52.07	57.89	0.1589	0.6021
iDNA-Prot	62.91	62.97	62.94	0.2588	0.6293
PLMLA	57.17	61.74	59.46	0.1894	0.5851
Random forest	87.65	54.15	70.90	0.4436	0.7507