Prediction and Analysis of Protein Ubiquitin Sites in the Model Plant A. thaliana

Table 6

Performances of different features in 1 : 3 ratio.

Method	Sp (%)	Sn (%)	Acc (%)	MCC	F1 score
DNABIND	65.49	67.14	66.32	0.3263	0.6603
DNAbinder	56.82	63.07	59.95	0.1993	0.5865
DBD-Threader	22.69	93.26	57.98	0.2252	0.3506
DNA-Prot	66.95	52.21	59.58	0.1936	0.6235
iDNA-Prot	64.98	65.37	65.17	0.3035	0.6511
PLMLA	59.80	63.86	61.83	0.2368	0.6104
Random forest	83.43	56.83	70.13	0.4176	0.7364