The Genetic Diversity and Interspecific Transmission of Circovirus in Rhizomys sinensis in Guangdong, Southern China

Figure 5

Phylogenetic analysis of our RS-origin PCV2 strain and reference PCV2 strains. (a) Phylogenetic tree based on PCV2 complete genome sequences; (b) phylogenetic tree based on PCV2 Cap gene sequences. Both phylogenetic trees were constructed by the ML method with the TN93 model using MEGA 11 software. One thousand bootstrap replications were used. The RS-origin and other rodent-origin PCV2 strains were indicated by red and black squares, respectively. The host origin of each strain was marked to the right of the strain with the corresponding species shadow.

(a)

(b)