Research Article
Identification and Genomic Analyses of a Multidrug Resistant Avian Pathogenic Escherichia coli Coharboring mcr-1, blaTEM-176 and blaCTX-M-14 Genes
Table 2
Genome features and resistome of EC012.
| | Feature | Chromosome | pEC012-1 | pEC012-2 | pEC012-3 | pEC012-4 | pEC012-5 | pEC012-6 |
| | Size (bp) | 4,771,666 | 257,019 | 123,652 | 84,973 | 46,420 | 42,886 | 3,240 | | GC content (%) | 50.76 | 46.46 | 49.01 | 48.37 | 52.46 | 45.73 | 43.58 | | ORF num | 4,429 | 294 | 150 | 112 | 40 | 51 | 2 | | Inc group (pMLST) | NA | IncHI2/HI2A/N | IncFIA/N | IncFIB | IncFII | IncX1 | ColRNAI | | Resistome | — | — | — | — | — | — | — | | Polymyxins | — | mcr-1 | — | — | — | — | — | | β-Lactams | ampC, ampH, and ampC1 | blaCTX-M-14 | — | — | — | — | — | | Cephalosporins | — | — | — | — | — | blaTEM-176 | — | | Aminoglycosides | — | aac(3)-IVa, aph(4)-Ia, aadA2, aadA1, and APH(3’)-Ia | — | — | — | aph(3’)-Ia | — | | Quinolones | — | qacH | — | — | — | qnrS9 and partical | — | | Sulphonamides | — | sul2 and sul3 | — | — | — | — | — | | Macrolides | — | mph(A) | — | — | — | — | — | | Fosfomicin | — | fosA3 | — | — | — | — | — | | Chloramphenicol | — | floR and cmlA1 | — | — | — | cmlA | — | | Tetracyline | — | tet (M) | — | — | — | — | — |
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