Comparative Transcriptomic Analyses of a Vero Cell Line in Suspension versus Adherent Culture Conditions

Table 1

Key upregulated networks and their top-associated genes (NTA) (subnetwork layouts in Figure 6).

Pathway GO ID	Pathway GO name	Adjusted -value	Top-ranking associated genes
GO:0042221	Response to chemical	1.4515-9	CRYAB, RHOU, ESR1, GRIN2A
GO:0048731	System development	1.4515-9	CRYAB, ESR1, C3, GRIN2A
GO:0023052	Signaling	5.052-9	PILRA, CRYAB, RHOU, ESR1, C3, GRIN2A, ATP2B2
GO:0009605	Response to external stimulus	5.052-9	ESR1, C3, GRIN2A
GO:0009653	Anatomical structure morphogenesis	5.052-9	CRYAB, RHOU, ESR1, C3
GO:0007154	Cell communication	1.5582-8	PILRA, CRYAB, RHOU, ESR1, C3, GRIN2A
GO:0007155	Cell adhesion	1.7218-8	CDH18